QTL #161574 Description:

 Trait Information
Trait name: Milk cholesterol content Vertebrate Trait Ontology: Milk cholesterol amount
Reported name: Product Trait Ontology: Milk cholesterol content
Symbol: MCHOL Clinical Measurement Ontology: n/a
 QTL Map Information
QTL Peak Location:79.67 (cM)
QTL Span:79.67-79.67 (cM)
61.3-61.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TPCN1 (two pore segment channel 1)
Links:   Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Canadian Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSP50 BeadChip and analyzed for milk cholesterol content. A total of 40,196 SNPs were used for analysis.
    Analysis:Univariate single-SNP mixed linear models were used.
    Software:DMU, Haploview
    Authors:Do DN, Schenkel FS, Miglior F, Zhao X, Ibeagha-Awemu EM
    Affiliation:Agriculture and Agri-Food Canada, Sherbrooke Research and Development Centre, Sherbrooke, QC, J1M 0C8, Canada
    Title:Genome wide association study identifies novel potential candidate genes for bovine milk cholesterol content
    Journal:Scientific reports, 2018, 8(1): 13239
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:mg/100g milk
    User inputs on reference #30185830
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