QTL #16116 Description:

 Trait Information
Trait name: Tenderness score Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Meat tenderness
Symbol: TEND Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:27
QTL Peak Location:67.16 (cM)
QTL Span:67.16-67.16 (cM)
36.4-36.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs134203075
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LOD_scoren/a
P_values0.0460
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ANK1 (ankyrin 1, erythrocytic)
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #16116
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Tissue samples were obtained from crossbred cattle; the major contributing breeds were Charolais, Hereford, Limousin, Friesian, Holstein-Friesian, and Simmental.
     Breeds associated:
    n/a
    Design:Animals were genotyped for five SNPs in the ankyrin 1 gene and analyzed for sensory and technological meat quality traits.
    Analysis:The least squares method of the GLM procedure was used.
    Software:Haploview, SAS
    Notes: 
    Links:Edit
     Reference
    Authors:Aslan O, Sweeney T, Mullen AM, Hamill RM
    Affiliation:Teagasc, Food Research Centre, Ashtown, Dublin, Ireland
    Title:Regulatory polymorphisms in the bovine Ankyrin 1 gene promoter are associated with tenderness and intramuscular fat content.
    Journal:BMC genetics, 2010, 11: 111
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:semimembranosus
    User inputs on reference #21159195
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk