QTL #160851 Description:

 Trait Information
Trait name: Clinical mastitis Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: CM Clinical Measurement Ontology: Disease incidence/prevalence measurement
 QTL Map Information
Chromosome:15
QTL Peak Location:51.00 (cM)
QTL Span:51.00-51.00 (cM)
37.6-37.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41568377
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
VARIANCEn/a
P_values0.074
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were first-lactation Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using either the Illumina Bovine 50K SNP BeadChip or the 10K Illumina Bovine Eurogenomics SNP chip, with data imputed to 50K, and analyzed for disease incidence. A total of 43,939 SNPs were used for analysis.
    Analysis:A linear mixed model was used.
    Software:GCTA, RANGER in R
    Notes: 
    Links:Edit
     Reference
    Authors:Naderi S, Bohlouli M, Yin T, König S
    Affiliation:Institute of Animal Breeding and Genetics, University of Gießen, Ludwigstr. 21b, 35390, Gießen, Germany
    Title:Genomic breeding values, SNP effects and gene identification for disease traits in cow training sets
    Journal:Animal genetics, 2018, 49(3): 178-192
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #29624705
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