QTL #157312 Description:

 Trait Information
Trait name: Clinical mastitis Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: CM Clinical Measurement Ontology: Disease incidence/prevalence measurement
 QTL Map Information
Chromosome:29
QTL Peak Location:68.21 (cM)
QTL Span:68.21-68.21 (cM)
49.1-49.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42193049
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
VARIANCEn/a
P_values6.80E-3
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were French Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using varying SNP chips, with data imputed to 50K, and analyzed for milking speed and mastitis traits. A total of 49,835 SNPs were used for analysis.
    Analysis:A mixed linear model was used.
    Software:GCTA, Bayz
    Notes: 
    Links:Edit
     Reference
    Authors:Marete A, Sahana G, Fritz S, Lefebvre R, Barbat A, Lund MS, Guldbrandtsen B, Boichard D
    Affiliation:INRA, UMR 1313 GABI, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France
    Title:Genome-wide association study for milking speed in French Holstein cows
    Journal:Journal of dairy science, 2018, 101(7): 6205-6219
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:yield deviation
    User inputs on reference #29705414
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