QTL #156391 Description:

 Trait Information
Trait name: Milk tetracosanoic acid content Vertebrate Trait Ontology: Milk fatty acid C24:0 amount
Reported name: Product Trait Ontology: Milk fatty acid C24:0 content
Symbol: MFA-C24:0 Clinical Measurement Ontology: n/a
 QTL Map Information
QTL Peak Location:35.50 (cM)
QTL Span:35.50-35.50 (cM)
27.1-27.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Canadian Holstein cattle.
     Breeds associated:
    Design:A high-throughput, genome-wide genotyping-by-sequencing method was used to identify 515,787 SNPs which were used in GWAS for milk traits.
    Analysis:A mixed linear model was used.
    Software:TASSEL, VCF Tools v0.1.8, PLINK, R 2.15.0, Beagle
    Authors:Ibeagha-Awemu EM, Peters SO, Akwanji KA, Imumorin IG, Zhao X
    Affiliation:Department of Animal Science, McGill University, 21,111 Lakeshore Road, Ste-Anne-De-Bellevue, QC, H9S 3V9 Canada
    Title:High density genome wide genotyping-by-sequencing and association identifies common and low frequency SNPs, and novel candidate genes influencing cow milk traits
    Journal:Scientific reports, 2016, 6: 31109
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #27506634
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