| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 40.44 (cM) |
| QTL Span: | 40.44-40.44 (cM)
36.6-36.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43702346 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.022 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PKD2 (polycystic kidney disease 2 (autosomal dominant)) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Angus, Hereford, and Angus-Hereford crossbred cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using a panel of 216 SNPs in candidate regions and analyzed for feed efficiency related traits. A total of 159 SNPs were ultimately used for analysis. |
| Analysis: | Three models were used to evaluate SNP associations, including allele substitution effects, genotypic, and additive/dominance models. |
| Software: | PLINK, ASReml, GVCBLUP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Abo-Ismail M K, Lansink N, Akanno E, Karisa B K, Crowley J J, Moore S S, Bork E, Stothard P, Basarab J A, Plastow G S |
| Affiliation: | Livestock Gentec at University of Alberta, Edmonton, AB, Canada |
| Title: | Development and validation of a small SNP panel for feed efficiency in beef cattle |
| Journal: | Journal of animal science, 2018, 96(2): 375-397 |
| Links: |
PubMed | Abstract | List all data
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