| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | 35.79 (cM) |
| QTL Span: | 35.79-35.79 (cM)
32.4-32.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs134857553 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using either the Illumina BovineSNP50 BeadChip (imputed to HD) or GeneSeek Genomic Profiler HD chip and analyzed for milk production traits. |
| Analysis: | A rapid longitudinal GWAS method based on a random regression model was used. |
| Software: | PLINK, DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ning C, Wang D, Zheng X, Zhang Q, Zhang S, Mrode R, Liu JF |
| Affiliation: | National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, China |
| Title: | Eigen decomposition expedites longitudinal genome-wide association studies for milk production traits in Chinese Holstein |
| Journal: | Genetics, Selection, Evolution : GSE, 2018, 50(1): 12 |
| Links: |
PubMed | Abstract | List all data
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