| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | 33.09 (cM) |
| QTL Span: | 33.09-33.09 (cM)
30.0-30.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133328416 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brown Swiss cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the BovineSNP50 or Bovine HD arrays, with data imputed to sequence level, and analyzed for milk fat percentage. A total of 13,036,370 variants were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | EMMAX, BEAGLE, FImpute, IMPUTE2, Minimac |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Frischknecht M, Pausch H, Bapst B, Signer-Hasler H, Flury C, Garrick D, Stricker C, Fries R, Gredler-Grandl B |
| Affiliation: | Qualitas AG, Chamerstrasse 56a, 6300, Zug, Switzerland |
| Title: | Highly accurate sequence imputation enables precise QTL mapping in Brown Swiss cattle |
| Journal: | BMC genomics, 2017, 18(1): 999 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | First lactation, days 298-302 |
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