| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 38.79 (cM) |
| QTL Span: | 38.79-38.79 (cM)
55.8-55.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41624258 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.07E-02 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped with the BovineSNP50 BeadChip and analyzed for susceptibility to Mycobacterium avium ssp. paratuberculosis. 35,772 SNPs were used in the analysis. |
| Analysis: | Data from two resource populations were analyzed separately and together. The most significant markers from these analyses were used in a stepwise regression analysis. |
| Software: | PLINK, R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kirkpatrick BW, Shi X, Shook GE, Collins MT |
| Affiliation: | Department of Animal Sciences, University of Wisconsin-Madison, Madison, WI 53706, USA |
| Title: | Whole-Genome association analysis of susceptibility to paratuberculosis in holstein cattle |
| Journal: | Animal Genetics, 2011, 42(2): 149-160 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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