QTL #140179 Description:

 Trait Information
Trait name: Milk casein percentage Vertebrate Trait Ontology: Milk casein amount
Reported name: Product Trait Ontology: Milk casein content
Symbol: MCASP Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:11
QTL Peak Location:n/a
QTL Span:n/a
103.3-103.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs110651042
Peak:
Lower, "Significant":rs110788899
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
LOD_scoren/a
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #140179
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Holstein, Montbeliarde, and Normande dairy cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to whole-genome sequence, and analyzed for milk protein content and composition.
    Analysis:Mixed linear models were used.
    Software:SAMtools, GCTA
    Notes: 
    Links:Edit
     Reference
    Authors:Sanchez MP, Govignon-Gion A, Croiseau P, Fritz S, Hozé C, Miranda G, Martin P, Barbat-Leterrier A, Letaïef R, Rocha D, Brochard M, Boussaha M, Boichard D
    Affiliation:GABI, INRA, AgroParisTech, Université Paris Saclay, 78350, Jouy-en-Josas, France
    Title:Within-breed and multi-breed GWAS on imputed whole-genome sequence variants reveal candidate mutations affecting milk protein composition in dairy cattle
    Journal:Genetics, selection, evolution : GSE, 2017, 49(1): 68
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #28923017
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk