QTL #139876 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:n/a
QTL Span:n/a
63.5-63.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110305039
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCE7.92%
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PDGFRB (platelet derived growth factor receptor beta )
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for 20 SNPs in the PDE3A, PDGFRB, and MARCH1 genes and analyzed for semen quality traits.
    Analysis:Mixed models were used
    Software:DMU, SAS, Haploview
    Notes: 
    Links:Edit
     Reference
    Authors:Liu S, Yin H, Li C, Qin C, Cai W, Cao M, Zhang S
    Affiliation:Department of Animal Genetics and Breeding, College of Animal Science and Technology, National Engineering Laboratory for Animal Breeding, China Agricultural University, Beijing, 100193, China
    Title:Genetic effects of PDGFRB and MARCH1 identified in GWAS revealing strong associations with semen production traits in Chinese Holstein bulls
    Journal:BMC genetics, 2017, 18(1): 63
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #28673243
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