| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | 0.43 (cM) |
| QTL Span: | 0.42-0.45 (cM)
0.5-0.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs134980195 |
| Peak: | |
| Lower, "Significant": | rs110885501 |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | - |
| Threshold significance level: | Significant |
 |
P_values | 2.19E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ANXA10 (annexin A10) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for CNVR association with embryonic mortality. A total of 116 CNVRs were used for association analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | GEMMA, PennCNV, THRGIBBS1F90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sasaki S, Ibi T, Akiyama T, Fukushima M, Sugimoto Y |
| Affiliation: | Shirakawa Institute of Animal Genetics, Japan Livestock Technology Association, Odakura, Nishigo, Fukushima, 961-8061, Japan |
| Title: | Loss of maternal ANNEXIN A10 via a 34-kb deleted-type copy number variation is associated with embryonic mortality in Japanese Black cattle |
| Journal: | BMC genomics, 2016, 17(1): 968 |
| Links: |
PubMed | Abstract | List all data
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