QTL #139144 Description:

 Trait Information
Trait name: Scrotal circumference Vertebrate Trait Ontology: Scrotum circumference
Reported name: Product Trait Ontology: n/a
Symbol: SCRCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:28
QTL Peak Location:n/a
QTL Span:n/a
36.0-37.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110746860
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:EDARADD (EDAR associated death domain)
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Canchim beef cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for reproductive traits. A total of 672,778 SNPs were used for analysis.
    Analysis:The Generalized Quasi-Likelihood Score (GQLS) method was used for GWAS.
    Software:REMLF90, Haploview, PANTHER
    Notes: 
    Links:Edit
     Reference
    Authors:Buzanskas ME, Grossi DDA, Ventura RV, Schenkel FS, Chud TCS, Stafuzza NB, Rola LD, Meirelles SLC, Mokry FB, Mudadu MA, Higa RH, da Silva MVGB, de Alencar MM, Regitano LCA, Munari DP
    Affiliation:Departamento de Zootecnia, Universidade Federal da Paraíba (UFPB), Areia, Paraíba 58397-000 Brazil
    Title:Candidate genes for male and female reproductive traits in Canchim beef cattle
    Journal:Journal of animal science and biotechnology, 2017, 8: 67
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:210 days of age
    User inputs on reference #28852499
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