QTL #138702 Description:

 Trait Information
Trait name: Milk yield Vertebrate Trait Ontology: Milk amount
Reported name: Product Trait Ontology: n/a
Symbol: MY Clinical Measurement Ontology: Milk yield
 QTL Map Information
Chromosome:29
QTL Peak Location:n/a
QTL Span:n/a
26.7-26.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs467989313
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.01
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SAA2 (serum amyloid A2)
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #138702
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Animals were genotyped for seven SNPs in the SAA1 gene and analyzed for milk production traits.
    Analysis:A single-trait linear regression model was used.
    Software:RUNGE, Beagle, Haploview, DMU
    Notes: 
    Links:Edit
     Reference
    Authors:Yang S, Gao Y, Zhang S, Zhang Q, Sun D
    Affiliation:College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, China Agricultural University, Beijing, 100193, China
    Title:Identification of Genetic Associations and Functional Polymorphisms of SAA1 Gene Affecting Milk Production Traits in Dairy Cattle
    Journal:PloS one, 2016, 11(9): e0162195
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #27610623
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk