QTL #138696 Description:

 Trait Information
Trait name: Milk fat percentage Vertebrate Trait Ontology: Milk fat amount
Reported name: Product Trait Ontology: Milk fat content
Symbol: FP Clinical Measurement Ontology: Milk fat percentage
 QTL Map Information
Chromosome:29
QTL Peak Location:37.29 (cM)
QTL Span:37.29-37.29 (cM)
26.7-26.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs378842589
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.0139
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SAA2 (serum amyloid A2)
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Animals were genotyped for seven SNPs in the SAA1 gene and analyzed for milk production traits.
    Analysis:A single-trait linear regression model was used.
    Software:RUNGE, Beagle, Haploview, DMU
    Notes: 
    Links:Edit
     Reference
    Authors:Yang S, Gao Y, Zhang S, Zhang Q, Sun D
    Affiliation:College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, China Agricultural University, Beijing, 100193, China
    Title:Identification of Genetic Associations and Functional Polymorphisms of SAA1 Gene Affecting Milk Production Traits in Dairy Cattle
    Journal:PloS one, 2016, 11(9): e0162195
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #27610623
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