QTL #138439 Description:

 Trait Information
Trait name: Scrotal circumference Vertebrate Trait Ontology: Scrotum circumference
Reported name: Product Trait Ontology: n/a
Symbol: SCRCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:17
QTL Peak Location:n/a
QTL Span:n/a
72.1-73.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs41852476
Peak:
Lower, "Significant":rs109130899
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCE0.66%
P_valuesn/a
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Brahman bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for scrotal circumference at four timepoints. A total of 40,024 SNPs were used for analysis.
    Analysis:Mixed models were used.
    Software:airemlf90, nlme in R
    Notes: 
    Links:Edit
     Reference
    Authors:Soares A C C, GuimarĂ£es S E F, Kelly M J, Fortes M R S, E Silva F F, Verardo L L, Mota R, Moore S
    Affiliation:Department of Animal Science, Universidade Federal de Vicosa, Vicosa, 36570000, Brazil
    Title:Multiple-trait genomewide mapping and gene network analysis for scrotal circumference growth curves in Brahman cattle
    Journal:Journal of animal science, 2017, 95(8): 3331-3345
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:18 months of age
    User inputs on reference #28805926
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