| QTL Map Information |
|---|
| Chromosome: | 21 |
| QTL Peak Location: | 50.90 (cM) |
| QTL Span: | 50.90-50.90 (cM)
40.3-40.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109409623 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.74E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were polled Nellore cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip, or the GGP Indicus HD BeadChip with data imputed to BovineHD, and analyzed for meat tenderness. A total of 369,007 SNPs were used for analysis. |
| Analysis: | GWAS was performed using the Efficient Mixed Model Association eXpedited (EMMAx) algorithm. |
| Software: | TASSEL, biomaRt in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Castro L M, Rosa G J M, Lopes F B, Regitano L C A, Rosa A J M, Magnabosco C U |
| Affiliation: | Embrapa Cerrados, Br 020 Km 18, PO Box 08223, Planaltina, DF, Brazil 73310-970 |
| Title: | Genomewide association mapping and pathway analysis of meat tenderness in Polled Nellore cattle |
| Journal: | Journal of animal science, 2017, 95(5): 1945-1956 |
| Links: |
PubMed | Abstract | List all data
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