QTL #135799 Description:

 Trait Information
Trait name: Tick resistance Vertebrate Trait Ontology: Response to parasitic infection trait
Reported name: Product Trait Ontology: n/a
Symbol: TICKR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:13
QTL Peak Location:17.72 (cM)
QTL Span:17.72-17.72 (cM)
14.2-14.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs41593583
Peak:rs111003257
Lower, "Significant":rs109429649
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
VARIANCE0.54%
P_valuesn/a
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Hereford and Braford cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for tick count. A total of 41,045 SNPs were used for analysis.
    Analysis:BayesA, BayesB, and BayesC(pi) methods were applied.
    Software:GenSEL, FImpute, BLUPf90, R software, BEDTools
    Notes: 
    Links:Edit
     Reference
    Authors:Sollero BP, Junqueira VS, Gomes CCG, Caetano AR, Cardoso FF
    Affiliation:Universidade Federal de Pelotas, Capão do Leão, Rio Grande do Sul, 96.000-010, Brazil
    Title:Tag SNP selection for prediction of tick resistance in Brazilian Braford and Hereford cattle breeds using Bayesian methods
    Journal:Genetics, selection, evolution : GSE, 2017, 49(1): 49
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #28619006
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