Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 1317 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: adjusted subcutaneous fat thickness between 12th and 13th ribs Product Trait Ontology: n/a
Symbol: FATTH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:0.945 (cM)
QTL Span:0-1.781 (cM)
Upper, "Suggestive":n/a
Upper, "Significant":AGLA17
Peak:IFNAR
Lower, "Significant":BM6438
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:-
Threshold significance level:-
F_Stat5.9
P_values0.44
Dominance effect:0.92
Additive effect:0.76
Associated Gene:IFNAR1 (interferon (alpha, beta and omega) receptor 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #1317
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  •  QTL Experiment in Brief
    Animals:80 Brahman (B), Angus (A), and F1 parents and grandparents with fourteen Angus (BCA) backcross (6 [AB, BA] � A and 8 A � [AB, BA]), 15 Brahman (BCB) backcross (7 [AB, BA] � B and 8 B � [AB, BA]) and 3 F2 (BA � AB) families.
     Breeds associated:
    n/a
    Design:Among the traits analyzed in this study were birth weight; weaning weight; yearling weight; slaughter weight; hot carcass weight; adjusted subcutaneous fat thickness between the 12th and 13th ribs; and percentage of kidney, pelvic, and heart fat.
    Analysis:Two interval-mapping approaches were applied for the detection of QTL segregating between or within breeds: multiple regression interval mapping under the line-cross model, and approximate restricted maximum likelihood(REML) mapping under the random model.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:J. J. Kim, F. Farnir, J. Savell, J. F. Taylor
    Affiliation:Texas A&M University, College Station; University of Liege, Liege, Belgium
    Title:Detection of Quantitative Trait Loci for Growth and Beef Carcass Fatness Traits in a Cross Between Bos taurus (Angus) and Bos indicus (Brahman) Cattle
    Journal:J Anim Sci, 2003, 81: 1933-1942
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #12926775
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  • Cite this Data:

    Animal QTLdb: QTL1317 was published in 2003, and was curated into QTLdb on 2010-12-15. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:1317

     

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