| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 44 (cM) |
| QTL Span: | 24.31-24.51 (cM)
22.8-23.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0014 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | S1PR1 (sphingosine-1-phosphate receptor 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #13141
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for a SNP in EDG1 and analyzed for carcass traits. |
| Analysis: | The restricted maximum likelihood approach was used. |
| Software: | MTDFREML |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sukegawa S, Miyake T, Takahagi Y, Murakami H, Morimatsu F, Yamada T, Sasaki Y |
| Affiliation: | Laboratory of Animal Breeding and Genetics, Graduate School of Agriculture, Kyoto University, Sakyoku, Kyoto 606-8502, Japan; tyamada@kais.kyoto-u.ac.jp |
| Title: | Replicated association of the single nucleotide polymorphism in EDG1 with marbling in three general populations of Japanese Black beef cattle |
| Journal: | BMC Res Notes, 2010, 3:66 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Nagasaki population |
User inputs on reference #20219139
Add your comments
Note similar findings
Note contradictions
|
