| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 30.22 (cM) |
| QTL Span: | 30.22-30.22 (cM)
20.1-20.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41618810 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.70E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Cattle were from a Jersey population and two Holstein populations, one from the Pacific Northwest and one from the Northeast US. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 v1 or v2 BeadChip and analyzed for Map tissue infection. Two meta-analyses were performed on the Holstein data, one of which included genotype imputation to WGS level. |
| Analysis: | Analyses were performed using EMMAX-GRM. |
| Software: | Golden Helix SVS 8 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kiser J N, White S N, Johnson K A, Hoff J L, Taylor J F, Neibergs H L |
| Affiliation: | Department of Animal Sciences, Washington State University, Pullman 99164, USA |
| Title: | Identification of loci associated with susceptibility to subspecies (Map) tissue infection in cattle |
| Journal: | Journal of animal science, 2017, 95(3): 1080-1091 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Map tissue infection |
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