QTL #126342 Description:

 Trait Information
Trait name: Milk cis-4,7,10,13,16,19-Docosahexaenoic acid content Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Milk fatty acid C22:6(n-3) content
Symbol: MFA-C22:6 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:15
QTL Peak Location:n/a
QTL Span:n/a
64.7-64.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41633590
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
LikelihoodR13.35
VARIANCEn/a
P_valuesn/a
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Norwegian Red Cattle.
     Breeds associated:
    Design:Animals were genotyped using the Affymetrix 25K bovine SNP chip and analyzed for milk fatty acid composition. A total of 17,343 SNPs were used for GWAS. Fine-mapping and further analyses of candidate regions were performed.
    Analysis:A single-marker association model was used.
    Software:BEAGLE, Samtools, DMU, ASReml, Haploview, R software
    Notes: 
    Links:Edit
     Reference
    Authors:Olsen HG, Knutsen TM, Kohler A, Svendsen M, Gidskehaug L, Grove H, Nome T, Sodeland M, Sundsaasen KK, Kent MP, Martens H, Lien S
    Affiliation:Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, PO Box 5003, 1432, ├ůs, Norway
    Title:Genome-wide association mapping for milk fat composition and fine mapping of a QTL for de novo synthesis of milk fatty acids on bovine chromosome 13
    Journal:Genetics, selection, evolution : GSE, 2017, 49(1): 20
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:DYD
    User inputs on reference #28193175
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