QTL #125082 Description:

 Trait Information
Trait name: Hindshank weight Vertebrate Trait Ontology: Hindlimb mass
Reported name: Product Trait Ontology: n/a
Symbol: HSHW Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:n/a
QTL Span:n/a
26.6-26.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41725166
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_values0.0262
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #125082
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Simmental cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for knuckle, biceps, and shank weight. A total of 588,150 SNPs were used for analysis.
    Analysis:A compressed mixed linear model was used.
    Software:GAPIT
    Notes: 
    Links:Edit
     Reference
    Authors:Song Y, Xu L, Chen Y, Zhang L, Gao H, Zhu B, Niu H, Zhang W, Xia J, Gao X, Li J
    Affiliation:Laboratory of Molecular Biology and Bovine Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
    Title:Genome-Wide Association Study Reveals the PLAG1 Gene for Knuckle, Biceps and Shank Weight in Simmental Beef Cattle
    Journal:PloS one, 2016, 11(12): e0168316
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #27997562
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2019 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk