QTL #121671 Description:

 Trait Information
Trait name: Calving interval Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: CALINTV Clinical Measurement Ontology: Time interval between offspring
 QTL Map Information
Chromosome:27
QTL Peak Location:n/a
QTL Span:n/a
43.6-44.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs43064076
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
LOD_scoren/a
P_values0.0013
Dominance effect:n/a
Additive effect:-3.831
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Australian Holstein and Jersey cows. Animal breed (IDs) involved:
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to HD, and analyzed for milk yield and calving interval. A total of 408,255 SNPs were used for analysis.
    Analysis:A mixed linear model was used.
    Software:BEAGLE, ASReml, R software
    Notes: 
    Links:Edit
     Reference
    Authors:Aliloo H, Pryce JE, González-Recio O, Cocks BG, Hayes BJ
    Affiliation:Dairy Futures Cooperative Research Centre (CRC), AgriBio, 5 Ring Road, Bundoora, VIC, 3083, Australia
    Title:Validation of markers with non-additive effects on milk yield and fertility in Holstein and Jersey cows
    Journal:BMC genetics, 2015, 16: 89
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #26193888
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