QTL #120270 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: number of sperm per ejaculate Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:27
QTL Peak Location:n/a
QTL Span:n/a
43.4-43.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42129110
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values2.31E-6
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for semen quality traits. A total of 41,188 SNPs were used for analysis.
    Analysis:A compressed mixed linear model was used.
    Software:SAS, DMU, BEAGLE, GAPIT
    Notes: 
    Links:Edit
     Reference
    Authors:Qin C, Yin H, Zhang X, Sun D, Zhang Q, Liu J, Ding X, Zhang Y, Zhang S
    Affiliation:College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, China Agricultural University, Beijing, 100193, China
    Title:Genome-wide association study for semen traits of the bulls in Chinese Holstein
    Journal:Animal genetics, 2016, 48(1):80-84
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Number of sperm per ejaculate
    User inputs on reference #27610941
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