Release 56
(Apr 24, 2025)

QTL 11483 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:76.2 (cM)
QTL Span:41.13-41.33 (cM)
36.4-36.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.030
Dominance effect:0.24
Additive effect:-0.57
Associated Gene:IGF1 (insulin-like growth factor 1 (somatomedin C))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #11483
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were from a hybrid population or were purebred Angus or Charolais.
     Breeds associated:
    Design:Animals were genotyped for a SNP in IGF1 and analyzed for fat deposition and carcass traits.
    Analysis:Association analysis was performed using a mixed linear regression model.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Islam KK, Vinsky M, Crews RE, Okine E, Moore SS, Crews DH Jr, Li C
    Affiliation:Agriculture and Agri-Food Canada Research Center, Department of Agricultural, Food and Nutritional science, University of Alberta, Edmonton, Alberta, Canada
    Title:Association analyses of a SNP in the promoter if IGF1 with fat deposition and carcass merit traits in hybrid, Angus and Charolais beef cattle
    Journal:Animal genetics, 2009, 40(5): 766-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Ultrasound backfat
    User inputs on reference #19466932
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL11483 was published in 2009, and was curated into QTLdb on 2010-04-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:11483

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team