QTL #106262 Description:

 Trait Information
Trait name: Conformation score Vertebrate Trait Ontology: Body conformation trait
Reported name: Product Trait Ontology: n/a
Symbol: CONF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:n/a
QTL Span:n/a
54.5-55.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs137557157
Peak:
Lower, "Significant":rs135342197
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_values0.0270
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Nellore cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip. CNVs were identified and analyzed for association with growth and production traits.
    Analysis:Linear regression in the additive genetic model was used to identify significant CNVs.
    Software:GenomeStudio, Golden Helix
    Notes: 
    Links:Edit
     Reference
    Authors:Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE
    Affiliation:Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Room 111, BARC-East, Beltsville, Maryland, 20705, USA
    Title:Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus
    Journal:BMC genomics, 2016, 17(1): 419
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:At weaning
    User inputs on reference #27245577
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