| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 39.1 (cM) |
| QTL Span: | 13.86-14.06 (cM)
12.1-12.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 1.2E-11 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NCAPG (non-SMC condensin I complex, subunit G) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #10430
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black or Japanese Brown cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 38 microsatellite markers and 5 SNPs in the region of interest on chromosome 6, then analyzed for carcass and body weight. |
| Analysis: | Interval mapping using a linear regression model was performed. An association analysis was also carried out between SNPs in 6 genes and carcass weight. |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Setoguchi, K; Furuta, M; Hirano, T; Nagao, T; Watanabe, T; Sugimoto, Y; Takasuga, A |
| Affiliation: | Shirakawa Institute of Animal Genetics, Japan Livestock Technology Association, Odakura, Nishigo, Fukushima 961-8061, Japan; takasuga@siag.or.jp |
| Title: | Cross-breed comparisons identified a critical 591-kb region for bovine carcass weight QTL (CW-2) on chromosome 6 and the Ile-442-Met substitution in NCAPG as a positional candidate. |
| Journal: | BMC genetics, 2009, 10: 43 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Japanese Black |
User inputs on reference #19653884
Add your comments
Note similar findings
Note contradictions
|
