Release 56
(Apr 24, 2025)

QTL 10115 Description:

 Trait Information
Trait name: Milk fat percentage Vertebrate Trait Ontology: Milk fat amount
Reported name: Milk fat percentage (PTA) Product Trait Ontology: Milk fat content
Symbol: FP Clinical Measurement Ontology: Milk fat percentage
 QTL Map Information
Chromosome:6
QTL Peak Location:38.4 (cM)
QTL Span:13.16-13.36 (cM)
11.5-11.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.048
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SPP1 (secreted phosphoprotein 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #10115
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  •  QTL Experiment in Brief
    Animals:Animals were Holsteins.
     Breeds associated:
    Design:Animals were genotyped for a SNP in osteopontin and analyzed for milk production traits and somatic cell score.
    Analysis:Weighted least squares analysis was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Leonard, S; Khatib, H; Schutzkus, V; Chang, Y M; Maltecca, C
    Affiliation:Department of Dairy Science, University of Wisconsin-Madison, Madison, WI 53706, USA
    Title:Effects of the osteopontin gene variants on milk production traits in dairy cattle.
    Journal:Journal of dairy science, 2005, 88 (11): 4083-6
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Cooperative Dairy DNA Repository population; PTA
    User inputs on reference #16230712
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  • Cite this Data:

    Animal QTLdb: QTL10115 was published in 2005, and was curated into QTLdb on 2009-12-22. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:10115

     

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