QTL #101018 Description:

 Trait Information
Trait name: Lauric acid content Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Meat fatty acid C12:0 content
Symbol: FA-C12:0 Clinical Measurement Ontology: n/a
 QTL Map Information
QTL Peak Location:n/a
QTL Span:n/a
35.3-35.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs109951928
Lower, "Significant":rs42181424
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:

User inputs on QTL #101018
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Nellore cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for fatty acid composition of the Longissimus thoracis. A total of 470,007 SNPs were used for analysis.
    Analysis:Single-step GBLUP was used to perform GWAS analyses.
    Software:GIBBS2F90, R sotfware
    Authors:Lemos MVA, Chiaia HLJ, Berton MP, Feitosa FLB, Aboujaoud C, Camargo GMF, Pereira ASC, Albuquerque LG, Ferrinho AM, Mueller LF, Mazalli MR, Furlan JJM, Carvalheiro R, Gordo DM, Tonussi R, Espigolan R, Silva RM, de Oliveira HN, Duckett S, Aguilar I, Baldi F
    Affiliation:Departamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil
    Title:Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure
    Journal:BMC genomics, 2016, 17(1): 213
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #26960694
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team