Authors: Yougbaré B, Soudré A, Ouédraogo D, Zoma BL, Tapsoba ASR, Sanou M, Ouédraogo-Koné S, Burger PA, Wurzinger M, Khayatzadeh N, Tamboura HH, Mwai OA, Traoré A, Sölkner J, Mészáros G
(Contact: pamela.burger@vetmeduni.ac.at ) Affiliation: Department of Sustainable Agricultural Systems, University of Natural Resources and Life Sciences, Vienna (BOKU), Vienna, Austria Title: Genome-wide association study of trypanosome prevalence and morphometric traits in purebred and crossbred Baoulé cattle of Burkina Faso Journal: PLoS One, 16: e0255089 (2021)
DOI :
10.1371/journal.pone.0255089 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Chest width
Chr.2 : Asso:313260 . Chr.5 : Asso:313259 , Asso:313261 , Asso:313332 . Chr.8 : Asso:313262 . Chr.9 : Asso:313264 , Asso:313268 . Chr.11 : Asso:313269 . Chr.14 : Asso:313263 , Asso:313335 . Chr.16 : Asso:313265 . Chr.20 : Asso:313267 . Chr.21 : Asso:313333 . Chr.25 : Asso:313266 , Asso:313336 . Chr.26 : Asso:313334 .
QTL for Ear length
Chr.1 : Asso:313270 , Asso:313282 . Chr.2 : Asso:313272 . Chr.5 : Asso:313271 , Asso:313273 , Asso:313277 , Asso:313278 , Asso:313281 . Chr.6 : Asso:313275 , Asso:313341 . Chr.8 : Asso:313283 , Asso:313284 . Chr.11 : Asso:313276 , Asso:313338 . Chr.14 : Asso:313279 . Chr.20 : Asso:313337 . Chr.22 : Asso:313339 . Chr.27 : Asso:313274 . Chr.28 : Asso:313280 , Asso:313340 .
QTL for Head width
Chr.5 : Asso:313285 , Asso:313291 , Asso:313292 , Asso:313302 . Chr.8 : Asso:313293 . Chr.9 : Asso:313295 . Chr.10 : Asso:313298 . Chr.11 : Asso:313290 , Asso:313303 . Chr.14 : Asso:313289 , Asso:313294 . Chr.16 : Asso:313297 . Chr.20 : Asso:313300 . Chr.21 : Asso:313287 . Chr.22 : Asso:313288 . Chr.25 : Asso:313286 , Asso:313299 . Chr.26 : Asso:313301 . Chr.28 : Asso:313296 .
QTL for Head length
Chr.3 : Asso:313305 . Chr.5 : Asso:313304 , Asso:313342 . Chr.8 : Asso:313314 . Chr.9 : Asso:313310 , Asso:313315 . Chr.11 : Asso:313308 , Asso:313316 . Chr.14 : Asso:313307 , Asso:313309 . Chr.16 : Asso:313312 . Chr.21 : Asso:313343 . Chr.22 : Asso:313306 . Chr.25 : Asso:313313 . Chr.28 : Asso:313311 .
QTL for Body depth
Chr.3 : Asso:313321 . Chr.5 : Asso:313317 , Asso:313318 . Chr.7 : Asso:313320 . Chr.11 : Asso:313324 , Asso:313346 . Chr.14 : Asso:313322 . Chr.15 : Asso:313344 . Chr.16 : Asso:313319 . Chr.18 : Asso:313323 . Chr.23 : Asso:313345 .
QTL for Body circumference
Chr.3 : Asso:313327 . Chr.5 : Asso:313325 , Asso:313326 . Chr.9 : Asso:313329 . Chr.11 : Asso:313331 , Asso:313347 . Chr.14 : Asso:313328 , Asso:313350 . Chr.16 : Asso:313349 . Chr.20 : Asso:313330 . Chr.21 : Asso:313348 .
QTL/association Reported by chromosomes:
Chr.1 (2) ,
Chr.2 (2) ,
Chr.3 (3) ,
Chr.5 (18) ,
Chr.6 (2) ,
Chr.7 (1) ,
Chr.8 (5) ,
Chr.9 (6) ,
Chr.10 (1) ,
Chr.11 (11) ,
Chr.14 (10) ,
Chr.15 (1) ,
Chr.16 (5) ,
Chr.18 (1) ,
Chr.20 (4) ,
Chr.21 (4) ,
Chr.22 (3) ,
Chr.23 (1) ,
Chr.25 (5) ,
Chr.26 (2) ,
Chr.27 (1) ,
Chr.28 (4) .
Pleiotropic QTL found:
5_rs109272264 Chr.5 5_rs109640343 Chr.5 8_rs135065077 Chr.8 9_rs136426547 Chr.9 9_rs43610326 Chr.9 16_rs137165740 Chr.16 20_rs42590304 Chr.20 25_rs41644803 Chr.25 28_rs136643473 Chr.28 11_rs43673256 Chr.11 11_rs110851328 Chr.11 14_rs135985893 Chr.14 14_rs110679046 Chr.14 21_rs109798411 Chr.21 22_rs110466191 Chr.22 26_rs42672508 Chr.26
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Yougbaré B, Soudré A, Ouédraogo D, Zoma BL, Tapsoba ASR, Sanou M, Ouédraogo-Koné S, Burger PA, Wurzinger M, Khayatzadeh N, Tamboura HH, Mwai OA, Traoré A, Sölkner J, Mészáros G (2021). Genome-wide association study of trypanosome prevalence and morphometric traits in purebred and crossbred Baoulé cattle of Burkina Faso. PLoS One, 16: e0255089;
Curated into QTLdb on 2025-01-29. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=CvNh0G4WzT
OR
Yougbaré B, Soudré A, Ouédraogo D, Zoma BL, Tapsoba ASR, Sanou M, Ouédraogo-Koné S, Burger PA, Wurzinger M, Khayatzadeh N, Tamboura HH, Mwai OA, Traoré A, Sölkner J, Mészáros G (2021). Genome-wide association study of trypanosome prevalence and morphometric traits in purebred and crossbred Baoulé cattle of Burkina Faso. PLoS One, 16: e0255089; DOI: https://dx.doi.org/10.1371/journal.pone.0255089
