January 17, 2007 (2:00PM-5:00PM), Town and Country Hotel, San Diego

QTL Database Round Table Discussion
Towards Minimal Information for Publication and Phenotype Ontology Development

Agenda

    Introduction

  1. 1:05 - The issue: from developing Animal QTLdb (Zhiliang Hu)
  2. 1:15 - Roslin Institute (Andy Law)
  3. 1:25 - Rat Genome Database (Mary Shimoyama)
  4. 1:35 - Mouse Genome Database (Susan Bello)
  5. 1:45 - Cattle QTL Database (David Adelson)
  6. 1:55 - dbGaP (Kim Pruitt)

    7. Development of minimal Standards for QTL publication

  7. 2:05 - Setting the Stage for MIQAS (Jim Reecy)
  8. 2:10 - Minimal Standards for QTL/Association Studies (Jan Aerts)
  9. 2:25 - Journal Editors perspective (Alan Archibald)
  10. 2:35 - Open discussion on Minimal Standards (Dave Burt, facilitator)
  11. 3:00 - Coffee and soda break
  12. 3:15 - Continued discussion and Future Objectives

    13. Development of standardized phenotype terminology

  13. 3:30 - Overview need to Develop Animal Trait Ontology (Zhiliang Hu)
  14. 3:40 - Overview of Animal Trait Ontology and PATO concepts (Laron Hughes)
  15. 3:50 - Chicken QTL Phenotype Ontology (Wilfrid Carre)
  16. 4:00 - Open discussion on database efforts: How can we work together? (Jim Reecy, facilitator)
  17. 4:30 - Sharing/access to curated data
  18. 4:55 - Future Directions
  19. 5:00 - Concluding remarks (Jim Reecy and Dave Burt)

Slides for download

Workshop Notes

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