Authors: Chen SY, Oliveira HR, Schenkel FS, Pedrosa VB, Melka MG, Brito LF
(Contact: britol@purdue.edu ) Affiliation: Department of Animal Sciences, Purdue University, West Lafayette, IN, 47907 Title: Using imputed whole-genome sequence variants to uncover candidate mutations and genes affecting milking speed and temperament in Holstein cattle Journal: Journal Of Dairy Science, 103(11): 10383-10398 (2021)
DOI :
S0022-0302(20)30726-8 Links:
PubMed | Abstract
| Copy data link
( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Temperament
Chr.1 : Asso:220027 , Asso:220028 . Chr.2 : Asso:220029 . Chr.3 : Asso:220030 , Asso:220031 , Asso:220032 . Chr.6 : Asso:220033 , Asso:220034 . Chr.8 : Asso:220035 , Asso:220036 . Chr.9 : Asso:220037 , Asso:220038 , Asso:220039 , Asso:220040 , Asso:220041 , Asso:220042 . Chr.10 : Asso:220043 , Asso:220044 . Chr.11 : Asso:220045 . Chr.12 : Asso:220046 , Asso:220047 . Chr.14 : Asso:220048 . Chr.16 : Asso:220049 , Asso:220050 , Asso:220051 . Chr.17 : Asso:220052 . Chr.18 : Asso:220053 . Chr.21 : Asso:220054 . Chr.22 : Asso:220055 , Asso:220056 . Chr.23 : Asso:220057 . Chr.24 : Asso:220058 . Chr.27 : Asso:220059 , Asso:220060 , Asso:220061 , Asso:220062 , Asso:220063 , Asso:220064 , Asso:220065 . Chr.29 : Asso:220066 .
QTL for Milking speed
Chr.4 : Asso:220067 , Asso:220068 . Chr.5 : Asso:220069 . Chr.6 : Asso:220070 , Asso:220071 . Chr.8 : Asso:220072 , Asso:220073 , Asso:220074 . Chr.9 : Asso:220075 . Chr.10 : Asso:220076 . Chr.11 : Asso:220077 , Asso:220078 , Asso:220079 , Asso:220080 , Asso:220081 . Chr.13 : Asso:220082 . Chr.14 : Asso:220083 , Asso:220084 , Asso:220085 , Asso:220086 . Chr.16 : Asso:220087 . Chr.18 : Asso:220088 . Chr.19 : Asso:220089 . Chr.20 : Asso:220090 , Asso:220091 , Asso:220092 . Chr.22 : Asso:220093 . Chr.23 : Asso:220094 , Asso:220095 . Chr.24 : Asso:220096 , Asso:220097 . Chr.26 : Asso:220098 . Chr.27 : Asso:220099 , Asso:220100 .
QTL/association Reported by chromosomes:
Chr.1 (2) ,
Chr.2 (1) ,
Chr.3 (3) ,
Chr.4 (2) ,
Chr.5 (1) ,
Chr.6 (4) ,
Chr.8 (5) ,
Chr.9 (7) ,
Chr.10 (3) ,
Chr.11 (6) ,
Chr.12 (2) ,
Chr.13 (1) ,
Chr.14 (5) ,
Chr.16 (4) ,
Chr.17 (1) ,
Chr.18 (2) ,
Chr.19 (1) ,
Chr.20 (3) ,
Chr.21 (1) ,
Chr.22 (3) ,
Chr.23 (3) ,
Chr.24 (3) ,
Chr.26 (1) ,
Chr.27 (9) ,
Chr.29 (1) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Chen SY, Oliveira HR, Schenkel FS, Pedrosa VB, Melka MG, Brito LF (2021). Using imputed whole-genome sequence variants to uncover candidate mutations and genes affecting milking speed and temperament in Holstein cattle. Journal of dairy science, 103(11): 10383-10398;
Curated into QTLdb on 2021-04-07. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=NqBz0K1SpV
OR
Chen SY, Oliveira HR, Schenkel FS, Pedrosa VB, Melka MG, Brito LF (2021). Using imputed whole-genome sequence variants to uncover candidate mutations and genes affecting milking speed and temperament in Holstein cattle. Journal of dairy science, 103(11): 10383-10398; DOI: https://dx.doi.org/S0022-0302(20)30726-8
