Authors: Leal-Gutiérrez JD, Elzo MA, Johnson D D, Hamblen H, Mateescu RG
(Contact: joelleal@ufl.edu ) Affiliation: Department of Animal Sciences, University of Florida, Gainesville, FL, USA Title: Genome wide association and gene enrichment analysis reveal membrane anchoring and structural proteins associated with meat quality in beef Journal: BMC Genomics, 20(1): 151 (2019)
DOI :
10.1186/s12864-019-5518-3 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Connective tissue amount
Chr.4 : Asso:172285 . Chr.8 : Asso:172286 . Chr.18 : Asso:172287 , Asso:172288 , Asso:172289 , Asso:172290 , Asso:172291 . Chr.19 : Asso:172292 . Chr.26 : Asso:172293 , Asso:172294 . Chr.29 : Asso:172295 , Asso:172296 , Asso:172297 .
QTL for Cooking loss
Chr.4 : Asso:172298 , Asso:172299 . Chr.5 : Asso:172300 , Asso:172301 , Asso:172302 , Asso:172303 , Asso:172304 , Asso:172305 , Asso:172306 . Chr.7 : Asso:172307 . Chr.12 : Asso:172308 . Chr.13 : Asso:172309 , Asso:172310 , Asso:172311 . Chr.14 : Asso:172312 . Chr.24 : Asso:172313 .
QTL for Beef flavor intensity
Chr.2 : Asso:172314 . Chr.13 : Asso:172315 . Chr.19 : Asso:172316 .
QTL for Juiciness
Chr.2 : Asso:172317 . Chr.9 : Asso:172318 . Chr.18 : Asso:172319 . Chr.19 : Asso:172320 , Asso:172321 , Asso:172322 , Asso:172323 , Asso:172324 . Chr.28 : Asso:172325 .
QTL for Marbling score
Chr.2 : Asso:172326 , Asso:172327 , Asso:172328 . Chr.5 : Asso:172329 , Asso:172330 , Asso:172331 , Asso:172332 , Asso:172333 . Chr.8 : Asso:172334 . Chr.11 : Asso:172335 , Asso:172336 . Chr.19 : Asso:172337 , Asso:172338 .
QTL for Tenderness score
Chr.5 : Asso:172339 , Asso:172340 . Chr.7 : Asso:172341 , Asso:172342 . Chr.19 : Asso:172343 . Chr.29 : Asso:172344 , Asso:172345 .
QTL for Shear force
Chr.18 : Asso:172346 , Asso:172347 . Chr.19 : Asso:172348 , Asso:172349 . Chr.27 : Asso:172350 , Asso:172351 . Chr.29 : Asso:172352 .
QTL/association Reported by chromosomes:
Chr.2 (5) ,
Chr.4 (3) ,
Chr.5 (14) ,
Chr.7 (3) ,
Chr.8 (2) ,
Chr.9 (1) ,
Chr.11 (2) ,
Chr.12 (1) ,
Chr.13 (4) ,
Chr.14 (1) ,
Chr.18 (8) ,
Chr.19 (12) ,
Chr.24 (1) ,
Chr.26 (2) ,
Chr.27 (2) ,
Chr.28 (1) ,
Chr.29 (6) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Leal-Gutiérrez JD, Elzo MA, Johnson D D, Hamblen H, Mateescu RG (2019). Genome wide association and gene enrichment analysis reveal membrane anchoring and structural proteins associated with meat quality in beef. BMC genomics, 20(1): 151;
Curated into QTLdb on 2019-06-25. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=NfVj4E3HhC
OR
Leal-Gutiérrez JD, Elzo MA, Johnson D D, Hamblen H, Mateescu RG (2019). Genome wide association and gene enrichment analysis reveal membrane anchoring and structural proteins associated with meat quality in beef. BMC genomics, 20(1): 151; DOI: https://dx.doi.org/10.1186/s12864-019-5518-3
