Authors: Saatchi M, Garrick DJ, Tait RG Jr, Mayes MS, Drewnoski M, Schoonmaker J, Diaz C, Beitz DC, Reecy JM
(Contact: jreecy@iastate.edu ) Affiliation: Department of Animal Science, Iowa State University, 2255 Kildee Hall, Ames, IA 50011, USA Title: Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattle Journal: BMC Genomics, 14:730 (2013)
DOI :
10.1186/1471-2164-14-730 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Tridecylic acid content
Chr.15 : QTL:19626 . Chr.19 : QTL:19697 , QTL:19746 .
QTL for Myristic acid content
Chr.6 : QTL:19631 . Chr.10 : QTL:19628 . Chr.19 : QTL:19627 , QTL:19630 , QTL:19747 . Chr.26 : QTL:19629 , QTL:19749 . Chr.29 : QTL:19686 , QTL:19748 .
QTL for Myristoleic acid content
Chr.10 : QTL:19633 , QTL:19752 . Chr.19 : QTL:19632 , QTL:19750 . Chr.26 : QTL:19634 . Chr.29 : QTL:19687 , QTL:19751 .
QTL for Pentadecylic acid content
Chr.1 : QTL:19636 . Chr.2 : QTL:19635 . Chr.22 : QTL:19753 .
QTL for Palmitic acid content
Chr.19 : QTL:19637 . Chr.29 : QTL:19688 .
QTL for Palmitoleic acid content
Chr.1 : QTL:19757 . Chr.10 : QTL:19640 . Chr.19 : QTL:19638 , QTL:19755 . Chr.26 : QTL:19639 , QTL:19756 . Chr.29 : QTL:19689 , QTL:19754 .
QTL for Margaric acid content
Chr.19 : QTL:19683 , QTL:19758 . Chr.26 : QTL:19682 . Chr.29 : QTL:19759 .
QTL for Cis-10-Heptadecenoic acid content
Chr.24 : Asso:19684 .
QTL for Stearic acid content
Chr.29 : QTL:19685 , QTL:19760 .
QTL for Oleic acid content
Chr.16 : QTL:19692 . Chr.19 : QTL:19690 , QTL:19761 . Chr.29 : QTL:19691 .
QTL for Dihomo-gamma-linolenic acid content
Chr.15 : QTL:19693 , QTL:19762 .
QTL for Eicosapentaenoic acid content
Chr.2 : QTL:19694 . Chr.8 : QTL:19696 . Chr.9 : QTL:19695 , QTL:19763 . Chr.15 : QTL:19764 .
QTL for Cis-Vaccenic acid content
Chr.28 : QTL:19698 .
QTL for Docosatetraenoic acid content
Chr.9 : QTL:19700 . Chr.23 : QTL:19699 . Chr.28 : QTL:19701 .
QTL for Docosapentaenoic acid content
Chr.2 : QTL:19702 . Chr.18 : QTL:19765 . Chr.27 : QTL:19703 .
QTL for Docosahexaenoic acid content
Chr.7 : QTL:19768 . Chr.15 : QTL:19704 , QTL:19705 , QTL:19766 , QTL:19767 .
QTL for Lignoceric acid content
Chr.2 : QTL:19708 , QTL:19709 , QTL:19771 , QTL:19774 . Chr.3 : QTL:19710 , QTL:19776 . Chr.4 : QTL:19773 , QTL:19780 . Chr.7 : QTL:19706 , QTL:19707 , QTL:19769 . Chr.8 : QTL:19714 . Chr.9 : QTL:19713 . Chr.11 : QTL:19775 . Chr.17 : QTL:19715 , QTL:19778 . Chr.19 : QTL:19711 , QTL:19712 , QTL:19779 . Chr.21 : QTL:19772 . Chr.27 : QTL:19777 . Chr.29 : QTL:19770 .
QTL for Long-chain fatty acid content
Chr.10 : QTL:19718 , QTL:19719 . Chr.18 : QTL:19720 . Chr.19 : QTL:19716 . Chr.29 : QTL:19717 .
QTL for Medium-chain fatty acid content
Chr.10 : QTL:19723 , QTL:19724 . Chr.19 : QTL:19721 , QTL:19781 . Chr.29 : QTL:19722 , QTL:19782 .
QTL for Monounsaturated fatty acid content
Chr.16 : QTL:19726 . Chr.19 : QTL:19725 , QTL:19783 .
QTL for Saturated fatty acid content
Chr.1 : QTL:19730 . Chr.7 : QTL:19729 . Chr.16 : QTL:19731 . Chr.19 : QTL:19727 . Chr.26 : QTL:19728 .
QTL for Polyunsaturated to saturated fatty acid ratio
Chr.7 : QTL:19732 .
QTL for Omega-3 unsaturated fatty acid content
Chr.2 : QTL:19736 . Chr.7 : QTL:19735 . Chr.8 : QTL:19784 . Chr.13 : QTL:19786 . Chr.15 : QTL:19737 , QTL:19785 . Chr.16 : QTL:19733 . Chr.18 : QTL:19734 .
QTL for Omega-6 polyunsaturated fatty acid content
Chr.2 : QTL:19738 . Chr.7 : QTL:19787 .
QTL for Omega-3 to omega-6 fatty acid ratio
Chr.1 : QTL:19739 , QTL:19742 . Chr.15 : QTL:19740 . Chr.17 : QTL:19741 .
QTL for Capric acid content
Chr.4 : QTL:19745 . Chr.9 : QTL:19744 . Chr.15 : QTL:19743 .
QTL for Cis-12-C18:1 fatty acid content
Chr.26 : QTL:19788 , QTL:20519 .
QTL for Trans-6/9-C18:1 fatty acid content
Chr.1 : QTL:20502 , QTL:20504 . Chr.2 : QTL:20503 , QTL:20506 , QTL:20520 . Chr.19 : QTL:20505 .
QTL for Trans-12-C18:1 fatty acid content
Chr.5 : QTL:20523 . Chr.20 : QTL:20508 , QTL:20522 . Chr.28 : QTL:20507 , QTL:20521 .
QTL for Trans-15-C18:1 fatty acid content
Chr.2 : QTL:20510 . Chr.13 : QTL:20509 . Chr.22 : QTL:20524 .
QTL for C22:1 fatty acid content
Chr.X : QTL:20531 . Chr.5 : QTL:20529 . Chr.8 : QTL:20516 , QTL:20530 . Chr.10 : QTL:20512 , QTL:20525 . Chr.13 : QTL:20513 , QTL:20528 . Chr.17 : QTL:20514 , QTL:20526 , QTL:20527 . Chr.18 : QTL:20511 . Chr.21 : QTL:20515 , QTL:20518 . Chr.29 : QTL:20517 .
QTL for Atherogenic index
Chr.19 : QTL:20532 , QTL:20535 . Chr.26 : QTL:20534 . Chr.29 : QTL:20533 .
QTL for Myristic and palmitic acid ratio
Chr.19 : QTL:20536 . Chr.29 : QTL:20537 .
QTL/association Reported by chromosomes:
Chr.X (1) ,
Chr.1 (7) ,
Chr.2 (13) ,
Chr.3 (2) ,
Chr.4 (3) ,
Chr.5 (2) ,
Chr.6 (1) ,
Chr.7 (8) ,
Chr.8 (5) ,
Chr.9 (5) ,
Chr.10 (10) ,
Chr.11 (1) ,
Chr.13 (4) ,
Chr.15 (12) ,
Chr.16 (4) ,
Chr.17 (6) ,
Chr.18 (4) ,
Chr.19 (27) ,
Chr.20 (2) ,
Chr.21 (3) ,
Chr.22 (2) ,
Chr.23 (1) ,
Chr.24 (1) ,
Chr.26 (10) ,
Chr.27 (2) ,
Chr.28 (4) ,
Chr.29 (18) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Saatchi M, Garrick DJ, Tait RG Jr, Mayes MS, Drewnoski M, Schoonmaker J, Diaz C, Beitz DC, Reecy JM (2013). Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattle. BMC Genomics, 14:730;
Curated into QTLdb on 2013-02-25. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=KdFw5G4NxV
OR
Saatchi M, Garrick DJ, Tait RG Jr, Mayes MS, Drewnoski M, Schoonmaker J, Diaz C, Beitz DC, Reecy JM (2013). Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattle. BMC Genomics, 14:730; DOI: https://dx.doi.org/10.1186/1471-2164-14-730
