Authors: Liu A, Wang Y, Sahana G, Zhang Q, Liu L, Lund MS, Su G
(Contact: guosheng.su@mbg.au.dk ) Affiliation: Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, 8830, Tjele, Denmark Title: Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins Journal: Scientific Reports, 7(1): 8487 (2017)
DOI :
10.1038/s41598-017-09170-9 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Interval from first to last insemination
Chr.1 : QTL:138502 , QTL:138546 , QTL:138549 . Chr.3 : Asso:138461 , Asso:138462 , Asso:138463 , Asso:138464 , QTL:138504 . Chr.4 : QTL:138507 , QTL:138553 . Chr.5 : QTL:138555 . Chr.6 : Asso:138467 , QTL:138558 . Chr.7 : Asso:138563 . Chr.9 : QTL:138568 . Chr.10 : QTL:138569 . Chr.11 : QTL:138516 . Chr.12 : QTL:138518 . Chr.13 : Asso:138472 , Asso:138474 , Asso:138475 , Asso:138476 , Asso:138477 , Asso:138479 , Asso:138480 , QTL:138575 . Chr.14 : QTL:138521 . Chr.17 : QTL:138585 . Chr.18 : Asso:138489 , Asso:138589 . Chr.21 : QTL:138530 . Chr.22 : QTL:138592 . Chr.23 : Asso:138493 , QTL:138535 , QTL:138537 , QTL:138539 . Chr.24 : QTL:138598 . Chr.25 : QTL:138599 . Chr.27 : QTL:138541 . Chr.28 : QTL:138602 .
QTL for Conception rate
Chr.1 : QTL:138498 , QTL:138545 , QTL:138547 . Chr.4 : Asso:138465 , QTL:138505 , QTL:138508 , QTL:138551 , QTL:138552 . Chr.5 : QTL:138510 , Asso:138556 . Chr.6 : QTL:138512 , QTL:138557 , QTL:138560 . Chr.7 : QTL:138562 , Asso:138564 . Chr.8 : Asso:138565 . Chr.9 : Asso:138566 . Chr.10 : Asso:138469 , QTL:138570 , QTL:138571 . Chr.13 : Asso:138481 , Asso:138573 , Asso:138576 . Chr.14 : QTL:138578 . Chr.17 : Asso:138486 , QTL:138499 , QTL:138583 , QTL:138584 . Chr.18 : QTL:138525 , Asso:138587 , Asso:138588 . Chr.19 : QTL:138590 . Chr.22 : Asso:138593 , QTL:138594 . Chr.23 : Asso:138492 , Asso:138494 , QTL:138500 . Chr.24 : QTL:138596 .
QTL for Interval to first estrus after calving
Chr.1 : QTL:138548 . Chr.2 : QTL:138550 . Chr.4 : Asso:138466 , QTL:138554 . Chr.5 : QTL:138509 . Chr.6 : QTL:138559 . Chr.7 : QTL:138561 . Chr.9 : QTL:138567 . Chr.10 : Asso:138468 . Chr.11 : Asso:138470 , Asso:138471 , QTL:138572 . Chr.13 : Asso:138473 , Asso:138478 , QTL:138574 , QTL:138577 . Chr.14 : QTL:138579 . Chr.15 : Asso:138482 , QTL:138580 . Chr.16 : Asso:138483 , Asso:138484 , Asso:138485 , QTL:138522 , QTL:138581 . Chr.17 : Asso:138487 , QTL:138582 . Chr.18 : Asso:138488 , QTL:138526 , QTL:138586 . Chr.21 : Asso:138490 , Asso:138491 , QTL:138591 . Chr.23 : QTL:138595 . Chr.24 : Asso:138495 , Asso:138496 , Asso:138497 , QTL:138597 . Chr.25 : QTL:138600 . Chr.28 : QTL:138501 , QTL:138544 , QTL:138601 .
QTL for Inseminations per conception
Chr.1 : QTL:138503 . Chr.4 : QTL:138506 . Chr.6 : QTL:138511 . Chr.8 : QTL:138513 . Chr.13 : QTL:138519 . Chr.18 : QTL:138528 . Chr.21 : QTL:138531 . Chr.22 : QTL:138534 . Chr.23 : QTL:138536 , QTL:138540 . Chr.27 : QTL:138542 . Chr.28 : QTL:138543 .
QTL for Calving to conception interval
Chr.9 : QTL:138514 . Chr.11 : QTL:138515 . Chr.14 : QTL:138520 . Chr.18 : QTL:138527 . Chr.22 : QTL:138533 . Chr.23 : QTL:138538 .
QTL for Non-return rate
Chr.11 : QTL:138517 . Chr.17 : QTL:138524 . Chr.18 : QTL:138529 .
QTL for Age at puberty
Chr.16 : QTL:138523 . Chr.21 : QTL:138532 .
QTL/association Reported by chromosomes:
Chr.1 (8) ,
Chr.2 (1) ,
Chr.3 (5) ,
Chr.4 (10) ,
Chr.5 (4) ,
Chr.6 (7) ,
Chr.7 (4) ,
Chr.8 (2) ,
Chr.9 (4) ,
Chr.10 (5) ,
Chr.11 (6) ,
Chr.12 (1) ,
Chr.13 (16) ,
Chr.14 (4) ,
Chr.15 (2) ,
Chr.16 (6) ,
Chr.17 (8) ,
Chr.18 (11) ,
Chr.19 (1) ,
Chr.21 (6) ,
Chr.22 (5) ,
Chr.23 (11) ,
Chr.24 (6) ,
Chr.25 (2) ,
Chr.27 (2) ,
Chr.28 (5) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Liu A, Wang Y, Sahana G, Zhang Q, Liu L, Lund MS, Su G (2017). Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins. Scientific reports, 7(1): 8487;
Curated into QTLdb on 2017-09-13. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=JkMt2D1IuQ
OR
Liu A, Wang Y, Sahana G, Zhang Q, Liu L, Lund MS, Su G (2017). Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins. Scientific reports, 7(1): 8487; DOI: https://dx.doi.org/10.1038/s41598-017-09170-9
