Cattle QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2019-02-12
Updated: 2024-04-23

Publication # 30031583 Details

Authors:	Weller J I, Bickhart D M, Wiggans G R, Tooker M E, O'Connell J R, Jiang J, Ron M, VanRaden P M (Contact: joel.weller@mail.huji.ac.il)
Affiliation:	USDA, Agricultural Research Service, Animal Genomics and Improvement Laboratory, Beltsville, MD 20705-2350
Title:	Determination of quantitative trait nucleotides by concordance analysis between quantitative trait loci and marker genotypes of US Holsteins
Journal:	Journal Of Dairy Science, 101(10): 9089-9107 (2018)	DOI: S0022-0302(18)30669-6
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Milk protein percentage reported for chromosome(s): Chr.3: Asso:167537. Chr.20: Asso:167563. QTL for Teat length reported for chromosome(s): Chr.5: Asso:167538. QTL for Body depth reported for chromosome(s): Chr.5: Asso:167539. Chr.14: Asso:167556. QTL for Pregnancy rate reported for chromosome(s): Chr.5: Asso:167540. Chr.18: Asso:167559, Asso:167560, Asso:167561. QTL for Milk fat percentage reported for chromosome(s): Chr.5: Asso:167541. Chr.14: Asso:167554, Asso:167555. QTL for Rump width reported for chromosome(s): Chr.5: Asso:167542. QTL for Length of productive life reported for chromosome(s): Chr.6: Asso:167543, Asso:167544. QTL for Somatic cell score reported for chromosome(s): Chr.6: Asso:167545, Asso:167546. QTL for Dairy form reported for chromosome(s): Chr.6: Asso:167547, Asso:167548. QTL for Conception rate reported for chromosome(s): Chr.6: Asso:167549. Chr.18: Asso:167557, Asso:167558. QTL for Rump angle reported for chromosome(s): Chr.7: Asso:167550, Asso:167551. QTL for Stature reported for chromosome(s): Chr.7: Asso:167552. Chr.11: Asso:167553. Chr.19: Asso:167562. QTL/association Reported by chromosomes: Chr.3 (1), Chr.5 (5), Chr.6 (7), Chr.7 (3), Chr.11 (1), Chr.14 (3), Chr.18 (5), Chr.19 (1), Chr.20 (1). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Weller J I, Bickhart D M, Wiggans G R, Tooker M E, O'Connell J R, Jiang J, Ron M, VanRaden P M (2018). Determination of quantitative trait nucleotides by concordance analysis between quantitative trait loci and marker genotypes of US Holsteins. Journal of dairy science, 101(10): 9089-9107; Curated into QTLdb on 2019-02-13. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=DoEb9H0WyO

Weller J I, Bickhart D M, Wiggans G R, Tooker M E, O'Connell J R, Jiang J, Ron M, VanRaden P M (2018). Determination of quantitative trait nucleotides by concordance analysis between quantitative trait loci and marker genotypes of US Holsteins. Journal of dairy science, 101(10): 9089-9107; DOI: https://dx.doi.org/S0022-0302(18)30669-6

Publication # 30031583 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: