Papers and Abstracts on Making the QTLdb:
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Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2022). Bringing
the Animal QTLdb and CorrDB into the future: meeting new challenges and providing
updated services. Nucleic Acids Research, Volume 50, Issue D1, Pages D956–D961.
DOI: 10.1093/nar/gkab1116
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Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2019). Building
a livestock genetic and genomic information knowledgebase through integrative developments
of Animal QTLdb and CorrDB. Nucleic Acids Research, Volume 47, Issue D1,
8 January 2019, Pages D701–D710. DOI: 10.1093/nar/gky1084
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Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2018). Development
of Animal QTLdb and CorrDB: Resynthesizing Big Data to Improve Meta-analysis of Genetic
and Genomic Information. The 11th World Congress on Genetics Applied to
Livestock Production (WCGALP). New Zealand, February 11-16, 2018.
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Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2018). Animal
QTLdb and CorrDB updates: integrative development of genetics/genomics databases
and tools to meet new challenges. Plant & Animal Genomes XXVI Conference,
January 13-17, 2018. Town & Country Convention Center, San Diego, CA.
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Zhi-Liang Hu, Carissa A. Park and James M. Reecy (2016). Developmental
progress and current status of the Animal QTLdb. Nucleic Acids Research,
44 (D1): D827-D833. DOI: 10.1093/nar/gkv1233
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Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2016). Animal
QTLdb: towards a comprehensive database and tool set for livestock genome research.
Plant & Animal Genomes XXIV Conference, January 10-15, 2016. Town & Country Convention
Center, San Diego, CA.
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Zhi-Liang Hu, Carissa A. Park, James E. Koltes, Eric Fritz-Waters and James M. Reecy
(2015). An Application Programming Interface
(API) for Programmable Access to Animal QTLdb. Plant & Animal Genomes
XXIII Conference, January 10-15, 2015. Town & Country Convention Center, San Diego,
CA.
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Zhi-Liang Hu, Carissa A. Park, Xiao-Lin Wu and James M. Reecy (2013). Animal
QTLdb: an improved database tool for livestock animal QTL/association data dissemination
in the post-genome era. Nucleic Acids Research, 41 (D1): D871-D879;
DOI: 10.1093/nar/gks1150
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Zhi-Liang Hu, Cari Park and James M. Reecy (2012). Animal
QTLdb Extension (V): Addition of New Data Types and Functions. Plant &
Animal Genomes XX Conference, January 14-19, 2012. Town & Country Convention Center,
San Diego, CA.
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Zhi-Liang Hu, Xiao-Lin Wu and James M. Reecy (2011). Extension
of Animal QTLdb: QTL Meta-analysis on the Fly. Poster paper published
on ACM-BCB '11, August 1-3, 2011, Chicago, IL, USA.
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Zhi-Liang Hu, Xiao-lin Wu, Cari Park and James M. Reecy (2011). Extension
of Animal QTLdb (IV): QTL Meta-Analysis on the Fly. Plant & Animal Genomes
XIX Conference, January 14-19, 2011. Town & Country Convention Center, San Diego,
CA.
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Zhi-Liang Hu, Carissa A. Park, Eric R. Fritz and James M. Reecy (2010). QTLdb:
A Comprehensive Database Tool Building Bridges between Genotypes and Phenotypes.
Invited Lecture with full paper published electronically on The 9th World Congress
on Genetics Applied to Livestock Production. Leipzig, Germany August 1-6, 2010.
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Zhi-Liang Hu, Cari Park, Eric Fritz, Mindy Dwindell, Mary Shimoyama, James M. Reecy
(2009). Expanding the Utility of Animal QTLdb. Plant
& Animal Genomes XVII Conference, January 10-14, 2009, Town & Country Convention
Center, San Diego, CA.
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Zhi-Liang Hu, Eric Ryan Fritz, Svetlana Dracheva, Behnam Abasht, Stacey N. Meyers,
Denis M. Larkin John Bastiaansen, Carol Scott, Xiao-Ping Li, Wonhee Jang, Kwan-Suk
Kim, Donna Maglott, Sean Humphray, Jonathan E. Beever, Susan J. Lamont, Harris A.
Lewin, Shu-hong Zhao, Jane Rogers, Jill Maddox, Max F. Rothschild and James M. Reecy
(2008). Animal QTLdb: A Tool Set to Warehouse and Compare
Cattle, Pigs, Chicken and Sheep QTL Within and Between Species. International
Society for Animal Genetics (ISAG), RAI Conference Centre, Amsterdam,The Netherlands.
July 20-24, 2008.
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Zhi-Liang Hu and James M. Reecy (2008). Extension Of Animal
QTLdb (II): Alignment Of New Microsatellite Markers, SNPs And Microarray Elements
To Cattle, Chicken And Pig QTL Maps And Comparative Mapping Tools For Positional
Genome Information Mining. January 12-16, 2008, Town & Country Convention
Center, San Diego, CA.
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Zhi-Liang Hu and James M. Reecy (2007). Animal
QTLdb: beyond a repository - A Public Platform for QTL Comparisons and Integration
with Diverse Types of Structural Genomic Information. Mammalian Genome,
Volume 18(1), 1-4 (2007). DOI: 10.1007/s00335-006-0105-8
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Zhi-Liang Hu, Eric Ryan Fritz and James M. Reecy (2007). Computer
Demo: A Public Platform for QTL Comparisons and Integration with Diverse Types of
Structural Genomic Information. Plant & Animal Genome XV Conference, San
Diego, CA, January 13-17, 2007.
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Zhi-Liang Hu, Eric Ryan Fritz and James M. Reecy (2007). AnimalQTLdb:
a livestock QTL database tool set for positional QTL information mining and beyond.
Nucleic Acids Research, 2007, 35 (Database issue):D604-D609.
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Zhi-Liang Hu, Sean Humphray, Carol Scott, Stacey N. Meyers, Jane Rogers, Max F. Rothschild
and James M. Reecy (2006). Extension of PigQTLdb: Genome-wide
Alignment of BAC FPC Maps and RH Maps for QTL Positional Gene Mining. Plant
& Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
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Zhi-Liang Hu, Svetlana Dracheva, Wonhee Jang, Donna Maglott, John Bastiaansen, Max
F. Rothschild and James M. Reecy (2005). A
QTL Resource and Comparison Tool for Pigs: PigQTLDB. Mammalian Genome.
(2005) Volume 16(10):792-800. DOI: 10/fcrzqv
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Zhi-Liang Hu, Svetlana Dracheva, Wonhee Jang, Donna Maglott, John Bastiaansen, Max
F. Rothschild and James M. Reecy (2005). PigQTLdb: A Pig
QTL Database. Plant & Animal Genome XIII Conference, San Diego, CA, January
15-19, 2005.
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Zhi-Liang Hu, James Reecy and Max Rothschild (2005). A
Quantitative Trait Loci Resource and Comparison Tool for Pigs: PigQTLDB.
Iowa State "Animal
Industry 2005 Report".
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Zhi-Liang Hu and Max Rothschild (2003). A Frame-Work for
Developing the Pig QTL Database. [The 13th North American Colloquium on
Animal Cytogenetics & Gene Mapping. Louisville, Kentucky, July 13-17, 2003.]
Cytogenet Genome Res 102:357.
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