Custom mapping results
Data Repository
Name Size Time Last Modified
Affy_2005_blast.gff2.09 MB2012-02-13 17:53:05
Affy_2010_blast.gff2.98 MB2012-02-13 17:52:32
SNP_60K_build10.2_final.txt1.75 MB2012-04-18 17:19:21
pig_Oligo2build10.2.gff1.67 MB2012-04-30 21:57:21
 o SNP_60K_build10.2_final.txt
   - Pig 60K SNP data set
   - Mapping info by Martien Groenen et al [Martien.groenenwur.nl]

 o Affy_2005_blast.gff
   - 23935 sequences
   - 19351 sequences mapped

 o Affy_2010_blast.gff 
   - 40139 sequences (47769 SNOWBALL elements + 2370 miRNA seqs)
   - 34809 sequences mapped

 o pig_Oligo2build10.2.gff
   - 18224 consensus sequences from http://www.PigOligoArray.ORG/
   - 16653 sequences mapped

   Blast mapping criteria:
   Cut-off e-value: 1e-3; Identity > 80%; Alignment length > 30bp
   __Zhiliang


Web Access Statistics © 2003-2012 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team
::Helpdesk::