Chicken Genome Data Repository
Data Repository
Name Size Time Last Modified
Chicken_60K_info.txt.gz4.36 MB2011-03-21 09:06:43
Chicken_60K_tabl.txt.gz1.62 MB2011-03-21 09:07:24
Genome_build4 KB2012-02-08 11:45:46
ISU_Trinity.fa.gz33.46 MB2011-10-28 15:07:28
Multisites_contigs_unigenes.xlsx18.67 MB2012-01-27 18:54:50
Data sources/credits:

o Chicken_60K_info.txt.gz
  - 60K chip SNPs with their genome locations and flanking sequences

o Chicken_60K_tabl.txt.gz
  - All 350K Illumina seq. identified SNPs and their dbSNP numbers
  - Ref: Martien AM Groenen, Hendrik-Jan Megens, Yalda Zare,
    Wesley C Warren, LaDeana W Hillier, Richard PMA Crooijmans, Addie
    Vereijken, Ron Okimoto, William Muir and Hans H Cheng. The
    development and characterization of a 60K SNP chip for chicken.
    BMC Genomics 2011, 12:274 (31 May 2011) [Martien.Groenenwur.nl]

o Genome_Build
  - GFF files of the genome assembly

o ISU_Trinity.fa.gz
  - Chicken spleen EST sequences by Solexa deep sequencing.

o Multisites_contigs_unigenes.xlsx
  - Posted by Qinghua Nie (nqinghuaiastate.edu)


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