NOTE	1.	Primers are ordered on the chromosomal map starting from the tip of short arm (p) to the tip of long (q) arm within a chromosome. Clicking on the marker name will bring you more information about the marker.
	2.	Relative location values (cM) were retrieved from the USDA-MARC Swine Genome M ap except those markers whose names were labeled with *. The relative location (cM ) of markers labeled with * were obtained from PIGBASE.
	3.	For each primer pair in Set III, Set IV, Set V, Set VI, Set VII, Set VIII, Set IX and Set X, the forward primer is labeled with fluorescent dye only. Fluorescent labeled primer information for Sets I/II are indicated along with detailed primer information (click on marker name).
	4.	The suggested multiplex groups are based on information kindly provided by Rohrer et al. "Mapping 28 erythrocyte antigen, plasma protein and enzyme polymorphisms using an efficient genomic scan of the porcine genome" (Animal Genetics, 28:323-330).
	5.	All primers were made and therefore available in groups. Clicking on the group name will bring you the primer set information.
	6.	Operon recommendation for storage: It is recommended that the oligos be brought up in a slightly basic solution (i.e. pH=8). If they are brought up at pH<7 (deionized water is pH=5), it has been shown that the oligo can begin to degrade as soon as within a couple of weeks.

Chromosomal Location	Marker Name1	Relative Location(cM)2	Fluorescent Dye3	PCR Annealing Temperature	Multiplex Group4	Primer Set5
Chr.01	SW1514	0	Fam	55	-	Set VIII
Chr.01	SW1824	3	Tet	60	28	Set IV
Chr.01	SW552	9.1	Hex	60	-	Set VI
Chr.01	SW1515	16.4	Hex	60	34	Set V
Chr.01	SW64	23.5	Tet	58	-	Set I
Chr.01	SW1332	29.2	Hex	62	-	Set VIII
Chr.01	S0316	33.4	Fam	62	-	Set V
Chr.01	S0008	43.5	Fam	58	-	Set IX
Chr.01	SW1851	44.6	Tet	62	-	Set III
Chr.01	SW2130	49.4	Tet	60	-	Set VI
Chr.01	CGA	52.3	Hex	55	-	Set I
Chr.01	SW1123	52.9	Hex	57	-	Set IX
Chr.01	SW781	55.8	Hex	55	-	Set II
Chr.01	SW1430	58.5	Tet	60	-	Set IX
Chr.01	SW1668	60.2	Hex	60	-	Set X
Chr.01	SW2035	61.3	Fam	60	-	Set VI
Chr.01	SW2185	67.6	Fam	55	-	Set IV
Chr.01	SW65	70.2	Fam	65	-	Set IX
Chr.01	S0331	73	Fam	55	-	Set VII
Chr.01	SW80	75.1	Tet	60	-	Set VIII
Chr.01	S0313	78.7	Hex	55	-	Set II
Chr.01	S0113	80.5	Tet	60	-	Set II
Chr.01	SW1970	83.2	Hex	58	-	Set IX
Chr.01	SWR982	86.2	Fam	58	-	Set VI
Chr.01	S0155	93.9	Fam	55	-	Set I
Chr.01	SW1092	95.8	Tet	58	-	Set X
Chr.01	SW1311	100.8	Tet	58	-	Set VIII
Chr.01	SW974	102.9	Fam	58	9	Set IV
Chr.01	SWR1063	106.5	Tet	60	-	Set IX
Chr.01	S0320	112.5	Tet	58	-	Set V
Chr.01	SW1828	118.5	Fam	60	-	Set VIII
Chr.01	S0112	121.3	Tet	55	46	Set I
Chr.01	S0056	127.1	Hex	58	-	Set V
Chr.01	SW1301	140.5	Fam	58	26	Set IV
Chr.01	SW2512	144	Fam	50	-	Set IX
Chr.02	SW2443	0	Hex	62	-	Set III
Chr.02	SWR2516	0	Hex	60	-	Set VIII
Chr.02	SW2623	9.8	Tet	60	41	Set IV
Chr.02	SW256	19.2	Fam	62	-	Set I
Chr.02	SWR783	23.7	Tet	62	-	Set III
Chr.02	SWR1910	24.7	Hex	65	-	Set VI
Chr.02	SW1650	27.3	Hex	60	-	Set IX
Chr.02	S0141	31.2	Hex	55	-	Set II
Chr.02	SW575	32.2	Fam	60	-	Set X
Chr.02	SW240	42	Tet	55	40	Set I
Chr.02	SW1201	44.8	Tet	58	-	Set IV
Chr.02	SW1686	46	Tet	58	-	Set IX
Chr.02	SW1564	55	Fam	58	-	Set V
Chr.02	SW2167	57.2	Fam	65	-	Set IX
Chr.02	S0170	59.5	Fam	65	-	Set IX
Chr.02	SW1026	60.6	Tet	60	44	Set IV
Chr.02	SW1466	62.2	Hex	55	-	Set X
Chr.02	SW2442	64.8	Tet	62	-	Set VIII
Chr.02	SW395	66.1	Fam	55	-	Set II
Chr.02	S0226	68	Fam	55	-	Set I
Chr.02	SW1883	72.4	Tet	58	-	Set VI
Chr.02	SW2134	74.8	Fam	58	-	Set VIII
Chr.02	SW1517	76.9	Hex	58	-	Set IX
Chr.02	S0010	77.9	Hex	55	-	Set I
Chr.02	SW1695	82	Fam	58	-	Set VIII
Chr.02	S0370	85.1	Tet	55	-	Set X
Chr.02	SW1408	88.5	Hex	60	-	Set IX
Chr.02	SWR2157	89.2	Hex	60	31	Set IV
Chr.02	SW1879	102.1	Hex	55	2	Set VII
Chr.02	SW2514	104.3	Hex	62	-	Set III
Chr.02	SW1844	107.9	Hex	60	-	Set VIII
Chr.02	SWR345	114.4	Tet	55	-	Set IX
Chr.02	S0378	116	Hex	55	-	Set I
Chr.02	SW2192	116.2	Hex	65	10	Set IV
Chr.02	SWR308	128.2	Tet	65	-	Set VIII
Chr.02	S0036	132.1	Hex	58	13	Set III
Chr.03	SW274	0	Tet	60	-	Set IV
Chr.03	S0213	7.8	Tet	55	-	Set VII
Chr.03	SW2021	12.4	Tet	65	-	Set VI
Chr.03	SW72	17.8	Fam	58	-	Set I
Chr.03	SWR1637	27.6	Hex	65	-	Set IV
Chr.03	SW1443	40.1	Hex	58	-	Set VII
Chr.03	S0206	42.3	Fam	60	-	Set I
Chr.03	SW487	46	Tet	58	-	Set VIII
Chr.03	SW860	47	Tet	55	-	Set X
Chr.03	S0034	49.8	Hex	65	-	Set X
Chr.03	SW2618	50.8	Hex	58	49	Set IV
Chr.03	SWR978	52.9	Tet	62	-	Set IX
Chr.03	SW1315	55.7	Fam	58	-	Set IX
Chr.03	SW902	58.4	Fam	55	41	Set II
Chr.03	S0164	60.5	Tet	55	-	Set II
Chr.03	ACTG2	62.6	Fam	58	-	Set IX
Chr.03	SW828	64.8	Hex	58	-	Set IX
Chr.03	SW102	66.4	Hex	58	-	Set VIII
Chr.03	SW2141	70.1	Tet	58	-	Set IX
Chr.03	SW2570	72.3	Tet	58	-	Set V
Chr.03	SW2047	75.3	Hex	60	-	Set VIII
Chr.03	S0352	79.5	Fam	58	22	Set VII
Chr.03	SW142	81.5	Tet	58	-	Set X
Chr.03	S0358	83.5	Tet	65	-	Set VIII
Chr.03	S0167	84.7	Fam	55	-	Set X
Chr.03	S0216	86.1	Tet	55	-	Set I
Chr.03	SW314	90.6	Hex	62	-	Set VIII
Chr.03	SW2408	94.2	Fam	58	11	Set IV
Chr.03	S0002	102.2	Hex	62	-	Set I
Chr.03	SW1327	109.6	Fam	58	-	Set VI
Chr.03	SW349	112.6	Hex	62	-	Set IV
Chr.03	SW717	116.6	Tet	58	-	Set VII
Chr.03	APOB	121.4	Hex	60	-	Set X
Chr.03	S0165	129.3	Fam	62	-	Set III
Chr.04	SW2404	0	Hex	62	33	Set III
Chr.04	S0011	0	Hex	55	-	Set V
Chr.04	S0227	4.1	Hex	55	-	Set I
Chr.04	SW480	4.9	Tet	60	-	Set IX
Chr.04	SW2509	7.4	Fam	60	51	Set X
Chr.04	SW489	8	Hex	55	-	Set VI
Chr.04	S0301	27.1	Fam	55	11	Set II
Chr.04	SW2547	29.8	Fam	55	-	Set VII
Chr.04	SW2409	40.5	Hex	58	-	Set IX
Chr.04	S0001	41.8	Fam	55	-	Set I
Chr.04	SW969	43.7	Fam	60	-	Set VIII
Chr.04	Sw1678	48.4	Fam	58	-	Set X
Chr.04	SW2454	51.2	Tet	58	-	Set IX
Chr.04	SW1513	53.5	Hex	60	-	Set VIII
Chr.04	SW35	55.9	Fam	58	-	Set III
Chr.04	SW839	62.3	Fam	62	-	Set III
Chr.04	S0107	66.1	Tet	55	49	Set X
Chr.04	S0023	68	Fam	55	-	Set IX
Chr.04	S0217	69.6	Tet	62	-	Set III
Chr.04	SW1364	72	Tet	58	-	Set X
Chr.04	S0073	74.4	Fam	55	-	Set III
Chr.04	SW1996	77	Fam	60	-	Set IX
Chr.04	S0214	79	Tet	55	32	Set I
Chr.04	SW524	99.3	Hex	62	-	Set VII
Chr.04	SW2435	102.8	Hex	60	-	Set X
Chr.04	SW445	105.8	Tet	58	-	Set III
Chr.04	SW58	107.9	Tet	58	-	Set VII
Chr.04	S0097	120	Tet	58	-	Set I
Chr.04	S0161	121	Hex	65	-	Set IX
Chr.04	SWR153	125.6	Tet	58	-	Set VIII
Chr.04	SW856	130.1	Tet	62	48	Set IV
Chr.05	ACR	0	Fam	58	-	Set X
Chr.05	SW413	8.4	Hex	62	-	Set X
Chr.05	SW491	31.5	Tet	60	-	Set VI
Chr.05	SW1482	39.9	Tet	55	-	Set III
Chr.05	SWR453	57.9	Hex	55	-	Set I
Chr.05	SW2425	72.3	Tet	58	36	Set V
Chr.05	SW332	73.6	Hex	58	-	Set IX
Chr.05	SW2	78.7	Fam	55	-	Set III
Chr.05	SW1134	80.8	Tet	60	-	Set III
Chr.05	SW1071	82.9	Tet	62	-	Set IX
Chr.05	SW191	87.4	Fam	58	-	Set IX
Chr.05	S0005	88.2	Tet	58	-	Set I
Chr.05	SW963	95.5	Tet	55	-	Set VIII
Chr.05	SW1468	97.5	Tet	55	2	Set IV
Chr.05	SW1987	101.6	Fam	58	-	Set VII
Chr.05	SW152	107	Fam	62	-	Set VI
Chr.05	S0018	108	Tet	55	-	Set IX
Chr.05	SWR1526	110.1	Tet	62	-	Set X
Chr.05	SW310	111.1	Hex	62	-	Set VIII
Chr.05	SW1200	114.3	Fam	60	43	Set IV
Chr.05	SW986	115.4	Hex	58	-	Set IX
Chr.05	IGF1	118.7	Fam	58	-	Set I
Chr.05	SW995	125	Fam	58	21	Set III
Chr.05	SW1954	130.3	Fam	55	-	Set VIII
Chr.05	SW378	134.4	Tet	60	45	Set III
Chr.05	SW967	145.9	Hex	58	43	Set I
Chr.06	S0099	0	Fam	68	-	Set V
Chr.06	S0035	7.3	Fam	65	-	Set III
Chr.06	SW2535	9.5	Fam	58	-	Set IX
Chr.06	SW973	18.6	Hex	58	-	Set VII
Chr.06	SW2406	21.4	Tet	58	42	Set III
Chr.06	SW1353	29.2	Hex	58	-	Set V
Chr.06	SW1841	41.5	Fam	58	-	Set VI
Chr.06	SW2525	45.9	Fam	58	37	Set X
Chr.06	SW1057	47.1	Hex	58	-	Set I
Chr.06	S0297	49.1	Fam	60	-	Set IX
Chr.06	SW1302	51.5	Tet	58	-	Set VII
Chr.06	S0087	62.8	Tet	58	32	Set I
Chr.06	SWR1130	65	Hex	64	-	Set IX
Chr.06	SW492	68.7	Hex	60	-	Set IX
Chr.06	SW1067	71.4	Hex	60	-	Set VI
Chr.06	S0294	73.4	Hex	60	-	Set X
Chr.06	SW133	77.2	Tet	60	-	Set VIII
Chr.06	SW1129	80.2	Tet	58	-	Set IX
Chr.06	SW4	82.1	Tet	58	-	Set X
Chr.06	SW122	83.3	Fam	55	53	Set I
Chr.06	SW1053	86.5	Tet	60	-	Set VIII
Chr.06	SW316	89.3	Hex	58	-	Set III
Chr.06	DG94	93	Hex	52	-	Set VII
Chr.06	SW1473	93.9	Tet	60	-	Set VIII
Chr.06	S0220	97	Fam	60	-	Set II
Chr.06	SW2173	97	Fam	62	-	Set VIII
Chr.06	SW71	98.6	Tet	62	-	Set IX
Chr.06	S0003	102	Hex	55	-	Set II
Chr.06	S0228	105.2	Tet	55	-	Set I
Chr.06	SW1647	108.7	Fam	60	-	Set IX
Chr.06	SW824	110.4	Tet	58	-	Set VIII
Chr.06	S0121	116	Hex	55	55	Set VIII
Chr.06	SW1881	121.1	Fam	58	29	Set IV
Chr.06	SW322	149.8	Tet	62	52	Set III
Chr.06	SW1680	153.9	Hex	65	-	Set IX
Chr.06	SW1328	155.7	Hex	58	-	Set VIII
Chr.06	SW1202	159.1	Fam	58	-	Set IX
Chr.06	SW2419	161.4	Tet	58	54	Set III
Chr.06	SW2415	164.6	Tet	50	-	Set IX
Chr.06	SW607	165.7	Fam	58	-	Set VII
Chr.07	SW2564	0	Tet	58	-	Set VI
Chr.07	S0025	3.7	Fam	55	16	Set I
Chr.07	SW2001	5.2	Tet	58	-	Set IX
Chr.07	SW1873	10.9	Hex	58	-	Set IX
Chr.07	SWR1343	12.2	Fam	60	-	Set IV
Chr.07	SW1354	22.3	Tet	58	24	Set IV
Chr.07	S0064	30.2	Fam	55	-	Set I
Chr.07	SW2155	32.9	Fam	65	-	Set VII
Chr.07	SW1369	48.2	Hex	60	23	Set IV
Chr.07	SW1409	57.1	Tet	55	-	Set IX
Chr.07	SW472	58.9	Tet	58	-	Set III
Chr.07	SW1856	61.5	Fam	58	-	Set VIII
Chr.07	S0102	70.1	Fam	55	-	Set I
Chr.07	SW1701	73.4	Fam	58	-	Set IX
Chr.07	SW859	75.3	Hex	60	-	Set VIII
Chr.07	SWR2036	78.2	Hex	60	-	Set IX
Chr.07	SW175	81.5	Hex	55	-	Set II
Chr.07	S0066	82.8	Tet	55	-	Set I
Chr.07	SW255	85.6	Fam	58	-	Set IX
Chr.07	SW352	87.7	Tet	55	-	Set III
Chr.07	SW2428	90.1	Fam	58	-	Set IX
Chr.07	SW252	99.4	Hex	62	-	Set VII
Chr.07	S0115	102.2	Hex	60	-	Set X
Chr.07	SW632	104.4	Tet	58	-	Set I
Chr.07	SW2002	109.5	Tet	58	-	Set VII
Chr.07	SWR773	117.3	Tet	50	-	Set VIII
Chr.07	SW581	123.8	Tet	57	-	Set VIII
Chr.07	S0101	134.9	Hex	60	25	Set I
Chr.07	SW2537	139.5	Fam	62	-	Set X
Chr.07	S0212	141.2	Fam	55	-	Set III
Chr.07	SW1816	151.3	Tet	60	-	Set IX
Chr.07	SW764	156	Tet	60	47	Set III
Chr.08	SW2410	0	Hex	55	-	Set III
Chr.08	SW31	3	Hex	58	-	Set VIII
Chr.08	S0098	12.3	Tet	65	-	Set V
Chr.08	SW905	20.8	Fam	55	-	Set I
Chr.08	SW2521	23.1	Hex	65	-	Set IX
Chr.08	SW1345	25.2	Fam	58	-	Set VII
Chr.08	SW268	27	Fam	60	-	Set IX
Chr.08	SW1702	29.6	Tet	60	-	Set IV
Chr.08	SWR1101	38.3	Fam	62	-	Set VI
Chr.08	SW1037	44.5	Tet	50	-	Set IX
Chr.08	SW1029	46.9	Hex	60	30	Set IV
Chr.08	SW205	47.9	Tet	58	-	Set X
Chr.08	SW1843	52.5	Hex	62	-	Set VII
Chr.08	SW2174	56.1	Tet	60	-	Set VIII
Chr.08	SW1953	58.2	Fam	58	-	Set IX
Chr.08	S0017	60.4	Hex	55	-	Set II
Chr.08	S0086	62.2	Fam	55	35	Set II
Chr.08	SW1679	65	Fam	58	-	Set VIII
Chr.08	DG33	70	Fam	52	-	Set X
Chr.08	S0069	74	Hex	62	-	Set IV
Chr.08	SW2160	80.1	Hex	58	-	Set IX
Chr.08	S0225	82.8	Hex	55	-	Set I
Chr.08	SW1337	89.9	Hex	58	-	Set VIII
Chr.08	SW763	92.4	Hex	62	8	Set IV
Chr.08	S0144	96.3	Tet	58	-	Set IX
Chr.08	SW1085	99	Tet	60	-	Set VII
Chr.08	SW1312	105.7	Hex	58	-	Set VI
Chr.08	SW790	107.5	Hex	62	-	Set IX
Chr.08	SW61	112.3	Hex	55	65	Set II
Chr.08	SPP1	120.2	Hex	60	-	Set II
Chr.08	SW1980	126.1	Tet	62	-	Set IX
Chr.08	S0178	127.7	Tet	58	-	Set I
Chr.09	SW983	4	Hex	60	41	Set III
Chr.09	SW21	15.1	Hex	60	6	Set III
Chr.09	S0024	27.4	Hex	55	-	Set V
Chr.09	SW911	36.8	Fam	55	54	Set I
Chr.09	SWR1848	49.3	Tet	60	-	Set VI
Chr.09	S0176	53.6	Hex	50	-	Set VIII
Chr.09	SW2401	57.1	Fam	58	46	Set IV
Chr.09	SW940	61.5	Hex	58	-	Set III
Chr.09	SW2074	65.4	Tet	50	-	Set X
Chr.09	SW54	66.7	Fam	63	-	Set V
Chr.09	SW511	70.4	Fam	60	-	Set IX
Chr.09	SW2571	73.3	Fam	58	-	Set VIII
Chr.09	SW1491	76.5	Tet	62	-	Set IX
Chr.09	SW2495	77	Hex	50	-	Set IX
Chr.09	SW539	79	Fam	55	-	Set I
Chr.09	SW944	83.3	Hex	58	-	Set VIII
Chr.09	S0019	86.4	Hex	55	-	Set III
Chr.09	SW1006	90.7	Tet	58	-	Set VII
Chr.09	SW989	96	Hex	55	-	Set VIII
Chr.09	S0295	100.5	Fam	58	-	Set III
Chr.09	SW2093	103.6	Tet	62	55	Set VI
Chr.09	SW174	122.9	Tet	55	-	Set I
Chr.09	SW2116	130.1	Fam	62	-	Set VII
Chr.09	SWR1014	134.7	Tet	62	-	Set VIII
Chr.09	SW749	139.4	Tet	58	-	Set III
Chr.09	SW1349	142.5	Fam	58	-	Set VIII
Chr.10	SW830	0	Fam	55	5	Set II
Chr.10	S0038	4.3	Hex	62	-	Set III
Chr.10	SWR136	7.6	Tet	58	-	Set VIII
Chr.10	SW249	17.3	Hex	55	-	Set I
Chr.10	SW767	20.4	Fam	60	-	Set IX
Chr.10	SW1894	23.2	Hex	58	-	Set V
Chr.10	SW497	39.3	Fam	58	4	Set IV
Chr.10	S0351	42.4	Hex	55	-	Set VIII
Chr.10	SW2195	44	Tet	58	-	Set VII
Chr.10	SWC19	50.5	Hex	58	28	Set IV
Chr.10	SW173	56.1	Tet	55	-	Set I
Chr.10	S0070	62.3	Hex	55	-	Set II
Chr.10	SWR1849	65.1	Hex	60	-	Set IX
Chr.10	SW1041	67.5	Hex	58	-	Set III
Chr.10	SW1991	79.4	Hex	58	-	Set VII
Chr.10	SW920	86.3	Fam	55	46	Set II
Chr.10	SW2043	87.7	Tet	50	-	Set IX
Chr.10	SW305	90.2	Fam	58	-	Set VIII
Chr.10	SW951	96	Hex	58	-	Set I
Chr.10	SW1626	104.2	Tet	62	-	Set V
Chr.10	SWR67	122	Hex	60	-	Set VIII
Chr.10	SW2067	124.1	Hex	55	-	Set III
Chr.11	S0385	0	Hex	55	-	Set III
Chr.11	S0392	1.9	Fam	58	-	Set VIII
Chr.11	S0391	5	Fam	50	-	Set VII
Chr.11	SW1460	9	Fam	58	42	Set VI
Chr.11	SWR2071	11.5	Tet	62	-	Set IX
Chr.11	SW2008	14.1	Hex	60	-	Set III
Chr.11	SW1632	16.6	Hex	58	9	Set X
Chr.11	S0182	33	Fam	50	-	Set V
Chr.11	S0071	43.7	Hex	55	23	Set I
Chr.11	SW1684	45.3	Tet	58	-	Set X
Chr.11	S0394	48.6	Hex	55	-	Set VII
Chr.11	SW1452	52.2	Tet	58	-	Set VIII
Chr.11	SW435	53.3	Tet	55	-	Set II
Chr.11	SW486	54.1	Hex	50	-	Set IX
Chr.11	S0230	56.4	Fam	55	-	Set II