U.S Pig Genome Coordination Program

The Swine Genome Sequencing Consortium

News and Updates (July 04, 2009)

News:
May.31,2008: PigTale newsletter, issue 2 for 2008
Nov.01,2007: Pig pre-ensembl release is now live
Jan.13,2006: USDA Awards $10 Million to Sequence Pig Genome
Jul.18,2005: NRI Porcine Genome Sequencing Program
Apr.06,2005: USDA NRI Porcine Genome Sequencing Program RFA
Oct.01,2002: Porcine Genome Sequencing Initiative (White Paper)

Sequencing in Progress — Statistics [ As of 05:09AM on Jul 04, 2009 (Sat) ]

Sanger: In process: 2,734,070,097; Finished: 97,581,777; Total: 2,831,651,874 ( # of nucleotides )

Chromosome	Number of active projects	Number of accessioned projects
U	30	28
1	2014	1954
2	1003	954
3	937	857
4	940	907
5	720	690
6	922	828
7	937	912
8	925	867
9	951	877
10	494	459
11	554	522
12	395	383
13	1293	1223
14	1032	987
15	965	915
16	521	498
17	456	444
18	378	359
Total:	16345	15504

Genbank: From Sanger: 434,211; In progress: 495,939; Total: 434,211 ( # of sequences deposited )

The Sequencing Statistics are updated daily ... .

Sequencing progress in a glance
Sequences in the Pipeline:
Browse in pre-Ensembl

For blast on NAGRP Server

Download from - NCBI Trace Archive

- Ensembl Trace Archive

- NCBI FTP site (preliminary assembly)

- Ensembl FTP (preliminary assembly)
New Tools
Related Links:
Swine Genome Sequencing Consortium (SGSC)
The Sanger Institute
SGSC Newsletter - "Pig Tale" ( 1, 2, 3, 4, 5, 6 )
Pig Genome Project at NCBI
Pig Genome on Ensembl pre!
The Sino-Danish Pig Genome Project
Swine Genome Sequencing Consortium: A Strategic Roadmap for Sequencing the Pig Genome

July 04, 2009 (Saturday)