U.S Pig Genome Coordination Program

The Swine Genome Sequencing Consortium

News and Updates (February 09, 2010)

News:
Nov.02,2009: First Draft Of The Pig: Researchers Sequence Swine Genome
May.31,2008: PigTale newsletter, issue 2 for 2008
Nov.01,2007: Pig pre-ensembl release is now live
Jan.13,2006: USDA Awards $10 Million to Sequence Pig Genome
Jul.18,2005: NRI Porcine Genome Sequencing Program
Apr.06,2005: USDA NRI Porcine Genome Sequencing Program RFA
Oct.01,2002: Porcine Genome Sequencing Initiative (White Paper)

Sequencing in Progress — Statistics [ As of 05:09AM on Feb 09, 2010 (Tue) ]

Sanger: In process: 2,882,374,420; Finished: 131,667,487; Total: 3,014,041,907 ( # of nucleotides )

Chromosome	Number of active projects	Number of accessioned projects
U	33	29
1	2019	2014
2	1016	1013
3	938	936
4	944	941
5	744	739
6	961	954
7	928	921
8	922	919
9	961	958
10	506	505
11	565	565
12	414	413
13	1319	1304
14	1023	1021
15	977	976
16	546	544
17	466	466
18	385	382
Total:	16556	16472

Genbank: From Sanger: 439,223; In progress: 495,528; Total: 439,223 ( # of sequences deposited )

The Sequencing Statistics are updated daily ... .

Sequences in the Pipeline:
Browse in pre-Ensembl

For blast on NAGRP Server

Download from - NCBI Trace Archive

- Ensembl Trace Archive

- NCBI FTP site (preliminary assembly)

- Ensembl FTP (preliminary assembly)
New Tools
Related Links:
Swine Genome Sequencing Consortium (SGSC)
SGSC Newsletter - "Pig Tale" ( 1, 2, 3, 4, 5, 6 )
Sanger Institute - Porcine Genome Sequencing Project
Pig Genome Project at NCBI
Pig Genome on NCBI ftp site
Pig Genome on Ensembl
The Sino-Danish Pig Genome Project
Swine Genome Sequencing Consortium: A Strategic Roadmap for Sequencing the Pig Genome

February 09, 2010 (Tuesday)