From zhu@iastate.edu Fri Jul 15 15:53:42 2005 Message-Id: <6.2.1.2.2.20050715154159.01e6d670@zhu.mail.iastate.edu> Date: Fri, 15 Jul 2005 15:52:51 -0500 From: Zhiliang Hu Subject: What's new on NAGRP animal genome web site (#3, 2005) To: Multiple Recipients of What's new on the NAGRP animal genome web site (#3, 2005): FUNCTIONS: ========= - New sequence databases have been added to the NAGRP blast server: o UniGene unique sequences from Human, Cattle, Chicken and Pigs o Cattle genomics sequences in 320,500 fragments (updated June 12) o 4.5 million Pig sequences including ~3.8 million fragments from Sino-Danish project representing 0.66x coverage of the pig genome URL: http://www.animalgenome.org/blast/ - The Expeditor tool is installed on a faster server where the blast subject EST databases are automatically updated weekly, which include TIGR Indices for Pigs, Cow, Chicken, Rainbow Trout, Atlantic Salmon, and Catfish; NCBI Unigene for Pigs, Cow, Chicken, and Sheep. URL: http://www.animalgenome.org/~hu/expeditor/ - Crittenden Genomics References is now managed with MySQL -- the search is made much easier and faster URL: http://www.animalgenome.org/cgi-bin/angenmap/mapref.pl - A web form is made available to public with which you can enter new meetings/ workshops/ short-courses information into the database that serves several livestock research communities: Enter data at http://www.animalgenome.org/cgi-bin/angenmap/mtg_new View data at: URL: http://www.animalgenome.org/share/mtg_aqua.html - Aquaculture URL: http://www.animalgenome.org/share/mtg_catt.html - Cattle URL: http://www.animalgenome.org/share/mtg_chic.html - Chicken URL: http://www.animalgenome.org/share/mtg_hors.html - Horse URL: http://www.animalgenome.org/share/mtg_pigs.html - Pigs URL: http://www.animalgenome.org/share/mtg_shee.html - Sheep URL: http://www.animalgenome.org/share/mtg_bioi.html - Bioinformatics - New tools make it a lot easier to search ANGENMAP mail archives: URL: http://www.animalgenome.org/community/discuss.html INFORMATION: =========== - ANGENMAP Discussion Group has changed its address: Forum: angenmap@animalgenome.org Subscription: angenmap-request@animalgenome.org - NAGRP cattle, pigs and aqua-genomics web sites have a new home: OLD: http://www.genome.iastate.edu NEW: http://www.animalgenome.org/ (UPDATE YOUR BOOKMARK!) Tip: To update your bookmark, or if you have difficulty to reach certain page you used to use, only change the domain part of an URL, and keep the path, like in: OLD: http://www.genome.iastate.edu/~hu/expeditor NEW: http://www.animalgenome.org/~hu/expeditor OLD: http://www.genome.iastate.edu/bioinfo/resources/intro.html NEW: http://www.animalgenome.org/bioinfo/resources/intro.html etc. - In addition, for what's new on the NAGRP genome sites, see URL: http://www.animalgenome.org/news/whatsnew.html