- Peter Karlskov-Mortensen, Zhi-Liang Hu, J. Gorodkin, James. M. Reecy, M. Fredholm (2007)
Identification of 10 882 porcine microsatellite sequences and virtual mapping of 4528 of these sequences.
Animal Genetics 38(4),401-405.
- Zhi-Liang Hu, Jie Bao and James M. Reecy (2007). Gene Ontology (GO) Terms Classifications Counter. Plant & Animal Genome XV Conference, San Diego, CA, January 13-17, 2007.
- Zhi-Liang Hu and James M. Reecy (2006). Animal QTLdb: Beyond a Repository - A Public Platform for QTL Comparisons and Integration with Diverse Types of Structural Genomic Information. Mammalian Genome, Volume 18, 1-4 (2007).
- Zhi-Liang Hu, Eric Ryan Fritz and James M. Reecy (2006). AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond. Nucleic Acids Research, 2007, 35(Database issue):D604-D609; doi:10.1093/nar/gkl946.
- Zhi-Liang Hu and James M. Reecy (2006). NRSP-8 Bioinformatics: Databases and Resources.
Proceedings of the 30th International Conference on Animal Genetics (ISAG) 2006, page 105, Porto Seguro, BA, Brazil, August 20-25, 2006.
- Bao, Jie, Zhi-Liang Hu, James Reecy, Vasant Honavar. (2006) Collaborative Construction of Animal Trait Ontologies and Annotation of Quantitative Trait Loci (QTL) Data from Multiple Species. submitted to KR-MED 2006.
- Bao, Jie, Zhi-Liang Hu, Doina Caragea, James Reecy, Vasant G Honavar (2006). "A Tool for Collaborative Construction of Large Biological Ontologies". The 4th International Workshop on Biological Data Management (BIDM'06) / 17th International Conference on Database and Expert Systems Applications (DEXA'06), pp. 191-195.
- Zhi-Liang Hu, Max F. Rothschild, and James Reecy (2006). "NRSP-8 Pig Genome Informatics: Databases and Resources". First European Conference on Pig Genomics, Lodi, Italy, February 20-21, 2006.
- Zhi-Liang Hu, Max F. Rothschild, and James Reecy (2006). "PigQTLDB Extensions: Towards Integrated Genomics Resources Tools". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Zhi-Liang Hu, Sean Humphray, Carol Scott, Jane Rogers, Antonio M. Ramos, James M. Reecy and Max F. Rothschild (2006). "Regional Genome Sequence Assembly for a Targeted Segment on Porcine Chromosome 17". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Antonio M Ramos, Zhi-Liang Hu, Sean Humphray, Jane Rogers, Jim Reecy, Max F Rothschild (2006). "From Genome Scan To Fine Mapping To Sequence Information: Steps Towards The Clarification Of The Mechanisms Controlling Porcine Chromosome 17 QTL For Meat Quality". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Zhi-Liang Hu, Jie Bao, Max F. Rothschild, Vasant Honavar and James M. Reecy (2006). "Developing Frameworks And Tools For Animal Trait Ontology (ATO)". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Zhi-Liang Hu, Sean Humphray, Carol Scott, Stacey N. Meyers, Jane Rogers, Max F. Rothschild and James M. Reecy (2006). "Extension of PigQTLdb: Genome-wide Alignment of BAC FPC Maps and RH Maps for QTL Positional Gene Mining". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Zhi-Liang Hu, James M. Reecy and Wentian Li (2006). "A Database For Genetic Analysis Software". Plant & Animal Genome XIV Conference, San Diego, CA, January 14-18, 2006.
- Zhi-Liang Hu, Svetlana Dracheva, Wonhee Jang, Donna Maglott, John Bastiaansen, Max F. Rothschild and James M. Reecy (2005). "A QTL Resource and Comparison Tool for Pigs: PigQTLDB". Mammalian Genome. (2005) Volume 16(10):792-800.
- Zhi-Liang Hu, James Reecy and Max Rothschild (2005). "A Quantitative Trait Loci Resource and Comparison Tool for Pigs: PigQTLDB". Iowa State "Animal Industry 2005 Report".
- Zhi-Liang Hu, Svetlana Dracheva, Wonhee Jang, Donna Maglott, John Bastiaansen, Max F. Rothschild and James M. Reecy (2005). "PigQTLdb: A Pig QTL Database". Plant & Animal Genome XIV Conference, San Diego, CA, January 15-19, 2005.
- Zhi-Liang Hu, Kim Glenn, Antonio M. Ramos, Charles J. Otieno, Jim M. Reecy, and Max F. Rothschild (2005). "Expeditor: A Pipeline for Designing Primers Using Human Gene Structure and Livestock Animal EST Information". Journal of Heredity, Volume 96, Number 1, pp. 80-82.
- Zhi-Liang Hu, Kimberly Glenn, Antonio M. Ramos, Charles J. Otieno and Max F. Rothschild (2004). "Expeditor: A Pipeline for Designing Pig Primers Using Human Gene Structure and Pig EST Information". Plant & Animal Genomes XII Conference, San Diego, CA, January 10-14, 2004.
- Zhi-Liang Hu and Max Rothschild (2003). "A Frame-Work for Developing the Pig QTL Database". The 13th North American Colloquium on Animal Cytogenetics & Gene Mapping. Louisville, Kentucky, July 13-17, 2003.
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