Release 6
(Jan. 08, 2008)
This Pig Quantitative Trait Loci (QTL) database (PigQTLdb) has gathered all pig QTL data published during the past 10+ years. The database and its peripheral tools make it possible to compare, confirm and locate on pig chromosomes the most feasible location for genes responsible for quantitative trait important to pig production.

The current release of the PigQTLdb contains 1,831 QTLs from 113 publications. Those QTLs represent 316 different traits (see data summary for more recent updates). These data have also been submitted to the NCBI Gene and Map Viewer resources, where the information about markers are matched to marker records in NCBI's UniSTS database. For PigQTLdb development and releases history, see this supplementary note.

Information in the PigQTLdb can be accessed in the following ways:
  1. Search
    By chromosomes, animal trait names and/or key-words in the publication).

  2. Browse
    By chromosome numbers or animal trait ontology tree.

  3. View Maps
    A whole genome map and individual chromosomal maps are available.

  4. Data Summary
    QTL data statistics by chromosomes, traits, trait types and publication year.
This graph is adopted from the
Rat GDB with kind permission
REFERENCES:
Zhiliang Hu, Svetlana Dracheva, Wonhee Jang, Donna Maglott, John Bastiaansen, Max F. Rothschild and James M. Reecy (2005).
A QTL resource and comparison tool for pigs: PigQTLDB. Mammalian Genome. Volume 16(10):792-800.

Zhiliang Hu, Eric Ryan Fritz and James M. Reecy (2007). AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond. Nucleic Acids Research, 2007, 35(Database issue):D604-D609; doi:10.1093/nar/gkl946.

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Contact: NAGRP Bioinformatics Team 		May 13, 2008 (Tuesday)